RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 DYNC1I1O14576 645 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 ERLIN1O75477 346 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 SPAG6O75602 509 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 AP2A2O94973 939 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 PSMA3P25788 255 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 NSG1P42857 185 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 KPNA2P52292 529 aaKnown RBP11.23□□□□□ -0.61
RFX1-204ENST00000588885 PRAMEP78395 509 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 NFATC3Q12968 1075 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 TUBB3Q13509 450 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 LAMB3Q13751 1172 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 BOP1Q14137 746 aaKnown RBP11.23□□□□□ -0.61
RFX1-204ENST00000588885 SEMA3AQ14563 771 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 IL11RAQ14626 422 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 ZNF658BQ4V348 819 aaPredicted RBP11.23□□□□□ -0.61
RFX1-204ENST00000588885 UBAP2Q5T6F2 1119 aaKnown RBP11.23□□□□□ -0.61
RFX1-204ENST00000588885 EMBQ6PCB8 327 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 AFTPHQ6ULP2 937 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 CES3Q6UWW8 571 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 C6orf15Q6UXA7 325 aaPredicted RBP11.23□□□□□ -0.61
RFX1-204ENST00000588885 CCDC25Q86WR0 208 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 ACVR1CQ8NER5 493 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 OR4L1Q8NH43 312 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 TFGQ92734 400 aaPredicted RBP11.23□□□□□ -0.61
RFX1-204ENST00000588885 CAVIN3Q969G5 261 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.23□□□□□ -0.613e-8■■■■■ 70.6
RFX1-204ENST00000588885 KIAA1143Q96AT1 154 aaPredicted RBP11.23□□□□□ -0.61
RFX1-204ENST00000588885 SLC41A2Q96JW4 573 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 RANBP9Q96S59 729 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 SLC12A9Q9BXP2 914 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 RAB33BQ9H082 229 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 KLHL25Q9H0H3 589 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 ARGLU1Q9NWB6 273 aaPredicted RBP11.23□□□□□ -0.61
RFX1-204ENST00000588885 TCAF1Q9Y4C2 921 aa11.23□□□□□ -0.61
RFX1-204ENST00000588885 TMEM184BQ9Y519 407 aaPredicted RBP11.23□□□□□ -0.61
RFX1-204ENST00000588885 MRPS18BQ9Y676 258 aaKnown RBP11.23□□□□□ -0.61
RFX1-204ENST00000588885 TLCD2A6NGC4 264 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 SLC9B1P1A6NJY1 282 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 IQCF5A8MTL0 148 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 B8ZZF3 427 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 SMAPO00193 183 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 BTN3A3O00478 584 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 KATNA1O75449 491 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 TIAF1O95411 115 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 DLGAP3O95886 979 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 NTRK1P04629 796 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 CDH3P22223 829 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 F8A1P23610 371 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 NDUFS1P28331 727 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 ARL4CP56559 192 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 DHX9Q08211 1270 aaKnown RBP11.22□□□□□ -0.61
RFX1-204ENST00000588885 PRKAA1Q13131 559 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 ITIH4Q14624 930 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 FASTKD3Q14CZ7 662 aaKnown RBP11.22□□□□□ -0.61
RFX1-204ENST00000588885 GPR19Q15760 415 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 HIF1AQ16665 826 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 BBS9Q3SYG4 887 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 MSS51Q4VC12 460 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 SYTL3Q4VX76 610 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 FASTKD1Q53R41 847 aaKnown RBP11.22□□□□□ -0.61
RFX1-204ENST00000588885 PCID2Q5JVF3 399 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 BEND6Q5SZJ8 279 aaPredicted RBP11.22□□□□□ -0.61
RFX1-204ENST00000588885 ATP1A1-AS1Q5TC04 95 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 PWWP2BQ6NUJ5 590 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 C16orf46Q6P387 395 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 CAND1Q86VP6 1230 aaKnown RBP11.22□□□□□ -0.61
RFX1-204ENST00000588885 PPP1R3BQ86XI6 285 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 AGGF1Q8N302 714 aaeCLIP11.22□□□□□ -0.61
RFX1-204ENST00000588885 ESX1Q8N693 406 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 MCUQ8NE86 351 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 OR52E1Q8NGJ3 308 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 OR5AR1Q8NGP9 310 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 ZFPM2Q8WW38 1151 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 STAMBPL1Q96FJ0 436 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 TXLNGYQ9BZA5 131 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 PDE7BQ9NP56 450 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 SAYSD1Q9NPB0 183 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 SOHLH2Q9NX45 425 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 MARCH4Q9P2E8 410 aaPredicted RBP11.22□□□□□ -0.61
RFX1-204ENST00000588885 CROTQ9UKG9 612 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 RARRES3Q9UL19 164 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 PLAGL1Q9UM63 463 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 TDRKHQ9Y2W6 561 aaKnown RBP11.22□□□□□ -0.61
RFX1-204ENST00000588885 RPS6KL1Q9Y6S9 549 aa11.22□□□□□ -0.61
RFX1-204ENST00000588885 BTN3A1O00481 513 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 AVILO75366 819 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 FTH1P02794 183 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 ITGB2P05107 769 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 OR56A5P0C7T3 313 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 FGF5P12034 268 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 PVRP15151 417 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 MGAT1P26572 445 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 NMBRP28336 390 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 DLSTP36957 453 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 STAT5AP42229 794 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 MAGEA3P43357 314 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 CD151P48509 253 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 HSD11B2P80365 405 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 ABHD18Q0P651 414 aa11.21□□□□□ -0.61
RFX1-204ENST00000588885 RPA4Q13156 261 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms