RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 SHCBP1LQ9BZQ2 653 aa10.76□□□□□ -0.69
SKA2-206ENST00000581068 MID1IP1Q9NPA3 183 aa10.76□□□□□ -0.69
SKA2-206ENST00000581068 SEMA4BQ9NPR2 832 aaPredicted RBP10.76□□□□□ -0.69
SKA2-206ENST00000581068 TRNAU1APQ9NX07 287 aaKnown RBP10.76□□□□□ -0.69
SKA2-206ENST00000581068 KCNK4Q9NYG8 393 aa10.76□□□□□ -0.69
SKA2-206ENST00000581068 OPTCQ9UBM4 332 aa10.76□□□□□ -0.69
SKA2-206ENST00000581068 MARCOQ9UEW3 520 aaPredicted RBP10.76□□□□□ -0.69
SKA2-206ENST00000581068 ZDHHC2Q9UIJ5 367 aa10.76□□□□□ -0.69
SKA2-206ENST00000581068 DCTN4Q9UJW0 460 aa10.76□□□□□ -0.69
SKA2-206ENST00000581068 PSMD13Q9UNM6 376 aa10.76□□□□□ -0.69
SKA2-206ENST00000581068 ASF1AQ9Y294 204 aa10.76□□□□□ -0.69
SKA2-206ENST00000581068 USH1CQ9Y6N9 552 aa10.76□□□□□ -0.69
SKA2-206ENST00000581068 DGKBQ9Y6T7 804 aa10.76□□□□□ -0.69
SKA2-206ENST00000581068 XIRP2A4UGR9 3374 aa10.76□□□□□ -0.69
SKA2-206ENST00000581068 VCANP13611 3396 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 A0A0G2JND7 137 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 A0A1W2PR77 199 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 MYO1CO00159 1063 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 E2F3O00716 465 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 UBFD1O14562 309 aaKnown RBP10.75□□□□□ -0.69
SKA2-206ENST00000581068 GIPC1O14908 333 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 SCAMP1O15126 338 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 FGF4P08620 206 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 TDGF1P13385 188 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 ALOX15P16050 662 aaPredicted RBP10.75□□□□□ -0.69
SKA2-206ENST00000581068 TSPAN8P19075 237 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 MAOBP27338 520 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 BLKP51451 505 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 NUBP1P53384 320 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 AQP5P55064 265 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 PKNOX1P55347 436 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 CTBSQ01459 385 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 CSTF1Q05048 431 aaKnown RBP10.75□□□□□ -0.69
SKA2-206ENST00000581068 EIF2B5Q13144 721 aaKnown RBP10.75□□□□□ -0.69
SKA2-206ENST00000581068 GTF2H2Q13888 395 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 FZD2Q14332 565 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 UAP1L1Q3KQV9 507 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 CCSMST1Q4G0I0 132 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 SH2D4BQ5SQS7 431 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 GTF2H2CQ6P1K8 395 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 WASH2PQ6VEQ5 465 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 LPCAT2Q7L5N7 544 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 LRRC70Q7Z2Q7 622 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 GOLGA7Q7Z5G4 137 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 C1orf210Q8IVY1 113 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 DCUN1D3Q8IWE4 304 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 KLHDC8AQ8IYD2 350 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 TMEFF1Q8IYR6 380 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 TBC1D21Q8IYX1 336 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 CLYBLQ8N0X4 340 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 SLC22A18ASQ8N1D0 253 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 DTWD2Q8NBA8 298 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 PHC3Q8NDX5 983 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 DNASE2BQ8WZ79 361 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 ATP6V1E2Q96A05 226 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 RAD51AP1Q96B01 352 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 SKA1Q96BD8 255 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 FERD3LQ96RJ6 166 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 INSM2Q96T92 566 aaPredicted RBP10.75□□□□□ -0.69
SKA2-206ENST00000581068 TMEM120AQ9BXJ8 343 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 MIR1-1HGQ9H1L0 117 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 TRIT1Q9H3H1 467 aaKnown RBP10.75□□□□□ -0.69
SKA2-206ENST00000581068 SLC32A1Q9H598 525 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 STN1Q9H668 368 aaKnown RBP10.75□□□□□ -0.69
SKA2-206ENST00000581068 KCNK13Q9HB14 408 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 TM9SF3Q9HD45 589 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 WASH6PQ9NQA3 447 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 DNAJC28Q9NX36 388 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 STOX2Q9P2F5 926 aaPredicted RBP10.75□□□□□ -0.69
SKA2-206ENST00000581068 APOBEC2Q9Y235 224 aaKnown RBP10.75□□□□□ -0.69
SKA2-206ENST00000581068 TRAF6Q9Y4K3 522 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 ASB1Q9Y576 335 aa10.75□□□□□ -0.69
SKA2-206ENST00000581068 SPTBN5Q9NRC6 3674 aaKnown RBP10.74□□□□□ -0.69
SKA2-206ENST00000581068 BPTFQ12830 3046 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 PLXND1Q9Y4D7 1925 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 PDZK1P1A8MUH7 402 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 TLR4O00206 839 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 MATN2O00339 956 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 HDAC3O15379 428 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 KATNA1O75449 491 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 OTCP00480 354 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 WNT1P04628 370 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 EPB42P16452 691 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 RPL10P27635 214 aaKnown RBP10.74□□□□□ -0.69
SKA2-206ENST00000581068 HSD17B2P37059 387 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 HALP42357 657 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 GDF5P43026 501 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 SLC6A12P48065 614 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 SH3BP2P78314 561 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 ILF3Q12906 894 aaKnown RBP eCLIP10.74□□□□□ -0.692e-15■■■■□ 22.5
SKA2-206ENST00000581068 PTCHD3Q3KNS1 767 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 AGTRAPQ6RW13 159 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 ABRAXAS1Q6UWZ7 409 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 GPRIN3Q6ZVF9 776 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 PARGQ86W56 976 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 RGL4Q8IZJ4 473 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 SNX31Q8N9S9 440 aa10.74□□□□□ -0.69
SKA2-206ENST00000581068 OR5AR1Q8NGP9 310 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms