RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	HSPA14	Q0VDF9	509 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	ABR	Q12979	859 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	PRKAA1	Q13131	559 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	GRB7	Q14451	532 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	ZIC1	Q15915	447 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	ZNF789	Q5FWF6	425 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	C16orf46	Q6P387	395 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	ZNF449	Q6P9G9	518 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	TMEM135	Q86UB9	458 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	TBC1D21	Q8IYX1	336 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	SLC22A15	Q8IZD6	547 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	SPATA4	Q8NEY3	305 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	OR1L3	Q8NH93	324 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	OR5K2	Q8NHB8	316 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	GRK7	Q8WTQ7	553 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	CT55	Q8WUE5	264 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	BIRC8	Q96P09	236 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	FCRL4	Q96PJ5	515 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	ARHGAP9	Q9BRR9	750 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	IL1RAPL1	Q9NZN1	696 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	GALP	Q9UBC7	116 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	ANAPC5	Q9UJX4	755 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	PADI1	Q9ULC6	663 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	SOX13	Q9UN79	622 aa		13.72	□□□□□ -0.21
EDC4-210	ENST00000575507	KRT87P	A6NCN2	255 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	GOLGA8M	H3BSY2	632 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	PRMT5	O14744	637 aa	Predicted RBP	13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	KATNA1	O75449	491 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	SLCO2B1	O94956	709 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	CHRM5	P08912	532 aa	Predicted RBP	13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	PLA2G2A	P14555	144 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	TCN2	P20062	427 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	GABRA4	P48169	554 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	NFKB2	Q00653	900 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	CDC20	Q12834	499 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	GPS2	Q13227	327 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	ERV3-1	Q14264	604 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	CTSL3P	Q5NE16	218 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	BORA	Q6PGQ7	559 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	CCDC137	Q6PK04	289 aa	Known RBP	13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	CDHR3	Q6ZTQ4	885 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	ZNF605	Q86T29	641 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	FAM20C	Q8IXL6	584 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	CARF	Q8N187	725 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	CEP112	Q8N8E3	955 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	LINC01555	Q8NAE3	123 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	STAMBPL1	Q96FJ0	436 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	TTC1	Q99614	292 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	L2HGDH	Q9H9P8	463 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	MRM3	Q9HC36	420 aa	Known RBP	13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	STARD5	Q9NSY2	213 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	SOHLH2	Q9NX45	425 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	PCYOX1	Q9UHG3	505 aa		13.71	□□□□□ -0.21
EDC4-210	ENST00000575507	SMG1	Q96Q15	3661 aa	Known RBP	13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	PIPSL	A2A3N6	862 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	C2orf74	A8MZ97	194 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507		H3BMH7	237 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	PYCARD-AS1	I3L0S3	204 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	MATN2	O00339	956 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	SCRG1	O75711	98 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	UGT2B7	P16662	529 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	TTPA	P49638	278 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	RPS18	P62269	152 aa	Known RBP	13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	PLOD1	Q02809	727 aa	Predicted RBP	13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	NFATC3	Q12968	1075 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	DEFB109B	Q30KR1	87 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	CCSMST1	Q4G0I0	132 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	SYTL3	Q4VX76	610 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	PLEKHS1	Q5SXH7	462 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	SPESP1	Q6UW49	350 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	CENPU	Q71F23	418 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	BPHL	Q86WA6	291 aa	Predicted RBP	13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	CFAP61	Q8NHU2	1237 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	SLCO2A1	Q92959	643 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	IL17F	Q96PD4	163 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	POLG2	Q9UHN1	485 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	RUVBL2	Q9Y230	463 aa	Known RBP	13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	KLHL20	Q9Y2M5	609 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	PCDHGA6	Q9Y5G7	932 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	NFS1	Q9Y697	457 aa		13.7	□□□□□ -0.22
EDC4-210	ENST00000575507	ZCWPW2	A0A1B0GU75	182 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	CTAGE15	A4D2H0	777 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	AP3B1	O00203	1094 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	NDUFS3	O75489	264 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	CCNYL3	P0C7X3	344 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	CTAGE8	P0CG41	777 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	RPS3	P23396	243 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	FMO4	P31512	558 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	SHMT2	P34897	504 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	PPARG	P37231	505 aa	Predicted RBP	13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	MAGEA3	P43357	314 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	POLE2	P56282	527 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	DNASE1L3	Q13609	305 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	KYNU	Q16719	465 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	TYSND1	Q2T9J0	566 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	ANKRD20A4	Q4UJ75	823 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms