RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 E2F3O00716 465 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 AP3D1O14617 1153 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 IGLV3-25P01717 112 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 GRK5P34947 590 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 ERVPABLB-1P60509 514 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 EIF4EBP2Q13542 120 aaPredicted RBP16.48■□□□□ 0.23
LITAF-209ENST00000571688 RUNDC3AQ59EK9 446 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 SLC46A3Q7Z3Q1 461 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 VN1R5Q7Z5H4 357 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 SNX20Q7Z614 316 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 KBTBD8Q8NFY9 601 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 ANGPTL6Q8NI99 470 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 SUN5Q8TC36 379 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 ESAMQ96AP7 390 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 SH3GL1Q99961 368 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 PRDM8Q9NQV8 689 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.48■□□□□ 0.23
LITAF-209ENST00000571688 PNMA8CA0A1B0GUJ8 204 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 FAM220BPB1ANY3 271 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 LOC110117498-PIK3R3F6TDL0 507 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 H3BQ06 376 aaPredicted RBP16.48■□□□□ 0.23
LITAF-209ENST00000571688 CCRL2O00421 344 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 RHOBTB1O94844 696 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 ATXN1LP0C7T5 689 aaKnown RBP16.48■□□□□ 0.23
LITAF-209ENST00000571688 KCNE1P15382 129 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 OGNP20774 298 aaKnown RBP16.48■□□□□ 0.23
LITAF-209ENST00000571688 ENDOUP21128 410 aaKnown RBP16.48■□□□□ 0.23
LITAF-209ENST00000571688 ARL1P40616 181 aaPredicted RBP16.48■□□□□ 0.23
LITAF-209ENST00000571688 GMPSP49915 693 aaPredicted RBP16.48■□□□□ 0.23
LITAF-209ENST00000571688 STC1P52823 247 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 LIMK1P53667 647 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 DSC2Q02487 901 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 RAD51Q06609 339 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 ARHGAP1Q07960 439 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 C19orf57Q0VDD7 668 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 PTPRCAPQ14761 206 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 STARD3Q14849 445 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 TBCEQ15813 527 aaPredicted RBP16.48■□□□□ 0.23
LITAF-209ENST00000571688 LRRC26Q2I0M4 334 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 PRAMEF18Q5VWM3 479 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 LETMD1Q6P1Q0 360 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 CCDC190Q86UF4 302 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 ZDHHC21Q8IVQ6 265 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 PLPP6Q8IY26 295 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 OR52B6Q8NGF0 335 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 APH1BQ8WW43 257 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 PIK3R3Q92569 461 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 POP5Q969H6 163 aaKnown RBP16.48■□□□□ 0.23
LITAF-209ENST00000571688 CDK15Q96Q40 435 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 PLSCR3Q9NRY6 295 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 TRMT13Q9NUP7 481 aaKnown RBP16.48■□□□□ 0.23
LITAF-209ENST00000571688 EIF2B4Q9UI10 523 aaKnown RBP16.48■□□□□ 0.23
LITAF-209ENST00000571688 TBC1D24Q9ULP9 559 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 GPSM3Q9Y4H4 160 aa16.48■□□□□ 0.23
LITAF-209ENST00000571688 A0A0U1RQS6 177 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 LOC105371267A0A1B0GV96 52 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 PAGE1O75459 146 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 RPLP0P05388 317 aaKnown RBP16.47■□□□□ 0.23
LITAF-209ENST00000571688 EPHA2P29317 976 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 ITKQ08881 620 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 TTLL4Q14679 1199 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 NR6A1Q15406 480 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 BCL7AQ4VC05 210 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 XKR4Q5GH76 650 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 IL27RAQ6UWB1 636 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 CALHM3Q86XJ0 350 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 TRIM63Q969Q1 353 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 PCED1BQ96HM7 432 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 EGLN2Q96KS0 407 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 CCDC32Q9BV29 185 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 RASSF1Q9NS23 344 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 CATSPERZQ9NTU4 200 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 FAM50BQ9Y247 325 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 AP3M1Q9Y2T2 418 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 LYVE1Q9Y5Y7 322 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 AKT1P31749 480 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 HK3P52790 923 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 MAPKAPK3Q16644 382 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 TIGD6Q17RP2 521 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 TYSND1Q2T9J0 566 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 AP5B1Q2VPB7 878 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 RFTN2Q52LD8 501 aaPredicted RBP16.47■□□□□ 0.23
LITAF-209ENST00000571688 MARCH8Q5T0T0 291 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 GJC2Q5T442 439 aaPredicted RBP16.47■□□□□ 0.23
LITAF-209ENST00000571688 KIAA1614Q5VZ46 1190 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 PHACTR4Q8IZ21 702 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 RTL3Q8N8U3 475 aaKnown RBP16.47■□□□□ 0.23
LITAF-209ENST00000571688 PSD4Q8NDX1 1056 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 GRPEL2Q8TAA5 225 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 DNASE1L2Q92874 299 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 UBE2FQ969M7 185 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 RNF170Q96K19 258 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 DMRTB1Q96MA1 342 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 PITX2Q99697 317 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 ZFP14Q9HCL3 533 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 TAS2R13Q9NYV9 303 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 TAS2R9Q9NYW1 312 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 GINS2Q9Y248 185 aa16.47■□□□□ 0.23
LITAF-209ENST00000571688 MYBPHLA2RUH7 354 aa16.46■□□□□ 0.23
LITAF-209ENST00000571688 BTN3A1O00481 513 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms