RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	ACADL	P28330	430 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	FMO4	P31512	558 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	CCR7	P32248	378 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	CCNF	P41002	786 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	GNG11	P61952	73 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	CYP4F2	P78329	520 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	COL9A2	Q14055	689 aa	Predicted RBP	10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	KCNJ11	Q14654	390 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	KIR2DS3	Q14952	304 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	GPR19	Q15760	415 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	TTLL9	Q3SXZ7	439 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	PLEKHS1	Q5SXH7	462 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	PWWP2B	Q6NUJ5	590 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	NEPRO	Q6NW34	567 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	SPESP1	Q6UW49	350 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	NAPRT	Q6XQN6	538 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	UNC5A	Q6ZN44	842 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	ZNF534	Q76KX8	674 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	TIPARP	Q7Z3E1	657 aa	Known RBP	10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	DCUN1D3	Q8IWE4	304 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	LMNTD2	Q8IXW0	634 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	PPIL6	Q8IXY8	311 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	SLC22A15	Q8IZD6	547 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	MR1	Q95460	341 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	RAD51AP1	Q96B01	352 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	ZNF669	Q96BR6	464 aa	Predicted RBP	10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	TCTN2	Q96GX1	697 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	SLC12A9	Q9BXP2	914 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	GPR87	Q9BY21	358 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	SPRY4	Q9C004	299 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	ADNP	Q9H2P0	1102 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	XKR8	Q9H6D3	395 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	LATS2	Q9NRM7	1088 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	CROT	Q9UKG9	612 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	ITPR1	Q14643	2758 aa		10.05	□□□□□ -0.8
UBR1-207	ENST00000568782	FAM237B	A0A1B0GVD1	139 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	IQCF5	A8MTL0	148 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	NDC80	O14777	642 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	AVIL	O75366	819 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	SLCO2B1	O94956	709 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	PRB1	P04280	392 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	CHRM5	P08912	532 aa	Predicted RBP	10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	CD63	P08962	238 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	MSL3P1	P0C860	447 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	ZNF28	P17035	718 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	MAGEA6	P43360	314 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	RAB28	P51157	221 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	ITGA1	P56199	1179 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	CDC20	Q12834	499 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	ERV3-1	Q14264	604 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	SEMA3A	Q14563	771 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	TBR1	Q16650	682 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	ZNF658B	Q4V348	819 aa	Predicted RBP	10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	CRTC2	Q53ET0	693 aa	Predicted RBP	10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	TTC27	Q6P3X3	843 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	CES3	Q6UWW8	571 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	ADGRF3	Q8IZF5	1079 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	KRT222	Q8N1A0	295 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	DENND1A	Q8TEH3	1009 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	COG1	Q8WTW3	980 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	APOBEC4	Q8WW27	367 aa	Known RBP	10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	C17orf62	Q9BQA9	187 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	NAT9	Q9BTE0	207 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	ACTR5	Q9H9F9	607 aa	Predicted RBP	10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	INTS10	Q9NVR2	710 aa	Known RBP	10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	ICK	Q9UPZ9	632 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	CRYL1	Q9Y2S2	319 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	SAR1B	Q9Y6B6	198 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	AP1M2	Q9Y6Q5	423 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	MGA	Q8IWI9	3026 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	SPTB	P11277	2137 aa		10.04	□□□□□ -0.8
UBR1-207	ENST00000568782	LOC400499	M0QZD8	3231 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782		A0A0J9YY10	115 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	TCRBV7S3A2	A0A539	114 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782		C9J4A7	227 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	GOLGA8K	D6RF30	607 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	GOLGA8T	H3BQL2	631 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	SMAP	O00193	183 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	NKX2-8	O15522	239 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	GPC4	O75487	556 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	CREG1	O75629	220 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	USP1	O94782	785 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	TTC4	O95801	387 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	S1PR4	O95977	384 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	RECK	O95980	971 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	ST6GAL1	P15907	406 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	UGT2B7	P16662	529 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	ADAR	P55265	1226 aa	Known RBP	10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	DNASE1L3	Q13609	305 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	PTK6	Q13882	451 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	NAA25	Q14CX7	972 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	SF1	Q15637	639 aa	Known RBP	10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	LONRF1	Q17RB8	773 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	SLC5A12	Q1EHB4	618 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	TYSND1	Q2T9J0	566 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	DEFB109B	Q30KR1	87 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	ANKRD20A4	Q4UJ75	823 aa		10.03	□□□□□ -0.8
UBR1-207	ENST00000568782	ZNF470	Q6ECI4	717 aa		10.03	□□□□□ -0.8

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