RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 HSPA14Q0VDF9 509 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 CDC20Q12834 499 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 NFATC3Q12968 1075 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 ABRQ12979 859 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 GPS1Q13098 491 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 ERV3-1Q14264 604 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 SEMA3AQ14563 771 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 TPSAB1Q15661 275 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 DEFB109BQ30KR1 87 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 DNAJC21Q5F1R6 531 aaKnown RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 ARMC3Q5W041 872 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 PTRHD1Q6GMV3 140 aaKnown RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 FAM199XQ6PEV8 388 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 UNC5AQ6ZN44 842 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 SDCCAG8Q86SQ7 713 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 LDB1Q86U70 411 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 LRRC6Q86X45 466 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 TMEM126BQ8IUX1 230 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 REXO1L1PQ8IX06 675 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 SLC22A15Q8IZD6 547 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 MPP5Q8N3R9 675 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 RASGEF1CQ8N431 466 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 OR5K2Q8NHB8 316 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 CT55Q8WUE5 264 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 APOBEC4Q8WW27 367 aaKnown RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 STARD8Q92502 1023 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 CPT1BQ92523 772 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 TCTN2Q96GX1 697 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 MS4A14Q96JA4 679 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 TRAPPC9Q96Q05 1148 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 OR2A14Q96R47 310 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 TCF12Q99081 682 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 KIFC1Q9BW19 673 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 AP1M1Q9BXS5 423 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 GPR87Q9BY21 358 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 PITPNM3Q9BZ71 974 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 SLC25A18Q9H1K4 315 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 AKIRIN1Q9H9L7 192 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 FANCEQ9HB96 536 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 MRM3Q9HC36 420 aaKnown RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 LHX9Q9NQ69 397 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 LATS2Q9NRM7 1088 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 ACTR10Q9NZ32 417 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 OR6C2Q9NZP2 312 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 MARCH4Q9P2E8 410 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 TTC7AQ9ULT0 858 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 ICKQ9UPZ9 632 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 TDRKHQ9Y2W6 561 aaKnown RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 PCDHGA6Q9Y5G7 932 aa6.7□□□□□ -1.34
SF3B3-209ENST00000567635 HEMK1Q9Y5R4 338 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 MRPS18BQ9Y676 258 aaKnown RBP6.7□□□□□ -1.34
SF3B3-209ENST00000567635 SCN2AQ99250 2005 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 SCN3AQ9NY46 2000 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 TCRBV7S3A2A0A539 114 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 SDR42E2A6NKP2 422 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 IQCF5A8MTL0 148 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 TMEM150CB9EJG8 249 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 J3QKU1 62 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 PFDN6O15212 129 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 CPNE3O75131 537 aaKnown RBP6.69□□□□□ -1.34
SF3B3-209ENST00000567635 AVILO75366 819 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 GPC4O75487 556 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 RPN2P04844 631 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 CHRM5P08912 532 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-209ENST00000567635 PVRP15151 417 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 UGT2B7P16662 529 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 CYP2A7P20853 494 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 RPS3P23396 243 aaKnown RBP eCLIP6.69□□□□□ -1.343e-9■■■■□ 22
SF3B3-209ENST00000567635 PTPN4P29074 926 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 OAS2P29728 719 aaKnown RBP6.69□□□□□ -1.34
SF3B3-209ENST00000567635 COILP38432 576 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-209ENST00000567635 MAGEA6P43360 314 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 VPS41P49754 854 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 KCNAB2Q13303 367 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 DNASE1L3Q13609 305 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 KCNJ11Q14654 390 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 KIR2DS3Q14952 304 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 TMED2Q15363 201 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 KYNUQ16719 465 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 PLEKHS1Q5SXH7 462 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 MRNIPQ6NTE8 343 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 TTC27Q6P3X3 843 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 CASC4Q6P4E1 433 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 TTC23LQ6PF05 361 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 SPESP1Q6UW49 350 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 CES3Q6UWW8 571 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 VRK3Q8IV63 474 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 KRT222Q8N1A0 295 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 OTUD6BQ8N6M0 293 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 SLC38A9Q8NBW4 561 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 MCUQ8NE86 351 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 CFAP61Q8NHU2 1237 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 GSDMBQ8TAX9 411 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 SEC14L1Q92503 715 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 N4BP2L2Q92802 583 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-209ENST00000567635 MR1Q95460 341 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 CLIP3Q96DZ5 547 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 MFSD3Q96ES6 412 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 LRFN5Q96NI6 719 aa6.69□□□□□ -1.34
SF3B3-209ENST00000567635 PANX3Q96QZ0 392 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms