RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 ARMC3Q5W041 872 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 CYB5D1Q6P9G0 228 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 ZNF605Q86T29 641 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 HOOK3Q86VS8 718 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 KMT5CQ86Y97 462 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 TMEM126BQ8IUX1 230 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 VRK3Q8IV63 474 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 PPIL6Q8IXY8 311 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 MPP5Q8N3R9 675 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 LMNTD1Q8N9Z9 388 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 MFSD3Q96ES6 412 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 WBP1Q96G27 269 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 SLC45A3Q96JT2 553 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 KRT12Q99456 494 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 XAB2Q9HCS7 855 aaKnown RBP13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 ACTR10Q9NZ32 417 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 SEMA5BQ9P283 1151 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 ASIC3Q9UHC3 531 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 CDC23Q9UJX2 597 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 ICKQ9UPZ9 632 aa13.22□□□□□ -0.29
VPS9D1-204ENST00000565023 PIPSLA2A3N6 862 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 C2orf74A8MZ97 194 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 BHMG1C9JSJ3 638 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 DNALI1O14645 258 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 PRMT5O14744 637 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 TTI1O43156 1089 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 SCRG1O75711 98 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 VAPBO95292 243 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 F7P08709 466 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 CCNYL3P0C7X3 344 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 ACADLP28330 430 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 OAS2P29728 719 aaKnown RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 MAGEA3P43357 314 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 EIF3BP55884 814 aaKnown RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 NFKB2Q00653 900 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 CDC20Q12834 499 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 DEFB109BQ30KR1 87 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 FAM199XQ6PEV8 388 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 PCGF5Q86SE9 256 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 ADGRF3Q8IZF5 1079 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 D2HGDHQ8N465 521 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 C2orf73Q8N5S3 287 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 CT55Q8WUE5 264 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 SKA2Q8WVK7 121 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 FAM136AQ96C01 138 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 SERPINB12Q96P63 405 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 RUFY1Q96T51 708 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 TRIM56Q9BRZ2 755 aaKnown RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 EFHD1Q9BUP0 239 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 KIFC1Q9BW19 673 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 TSSK1BQ9BXA7 367 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 TFB2MQ9H5Q4 396 aaKnown RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 AKIRIN1Q9H9L7 192 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 MRM3Q9HC36 420 aaKnown RBP13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 C1GALT1Q9NS00 363 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 TREX1Q9NSU2 369 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 IL1RAPL1Q9NZN1 696 aa13.21□□□□□ -0.29
VPS9D1-204ENST00000565023 COL6A6A6NMZ7 2263 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 ATMQ13315 3056 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 ISM1B1AKI9 464 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 TMEM150CB9EJG8 249 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 PYCARD-AS1I3L0S3 204 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 MATN2O00339 956 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 ITGB2P05107 769 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 APOA4P06727 396 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 FMO4P31512 558 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 TTPAP49638 278 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 TUBB4BP68371 445 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 DNASE1L3Q13609 305 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 TUBB2AQ13885 445 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 MAP7Q14244 749 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 ERV3-1Q14264 604 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 TMED2Q15363 201 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 DEFB110Q30KQ9 67 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 BORAQ6PGQ7 559 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 UNC5AQ6ZN44 842 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 FAM20CQ8IXL6 584 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 TBC1D21Q8IYX1 336 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 MR1Q95460 341 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 ZNF669Q96BR6 464 aaPredicted RBP13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 ZNF501Q96CX3 271 aaPredicted RBP13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 SGSM3Q96HU1 749 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 IL17FQ96PD4 163 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 TRIM51Q9BSJ1 452 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 TUBB2BQ9BVA1 445 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 CARD6Q9BX69 1037 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 SLC7A5P2Q9GIP4 190 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 FANCEQ9HB96 536 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 LHX9Q9NQ69 397 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 SPHK1Q9NYA1 384 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 GNPTGQ9UJJ9 305 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 PADI1Q9ULC6 663 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 SOX13Q9UN79 622 aa13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 RUVBL2Q9Y230 463 aaKnown RBP13.2□□□□□ -0.3
VPS9D1-204ENST00000565023 CDC14CA4D256 554 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 SDR42E2A6NKP2 422 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 MAP3K7O43318 606 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 URI1O94763 535 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 MT-ND3P03897 115 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms