RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 FAM122BQ7Z309 247 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 TRAPPC11Q7Z392 1133 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 KCTD20Q7Z5Y7 419 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 PLCZ1Q86YW0 608 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 PLXDC1Q8IUK5 500 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 CNGA4Q8IV77 575 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 DHX40Q8IX18 779 aaKnown RBP2.47□□□□□ -2.01
RNF111-211ENST00000560952 KLHL7Q8IXQ5 586 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 KATNAL2Q8IYT4 538 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 SELENOHQ8IZQ5 122 aaKnown RBP2.47□□□□□ -2.01
RNF111-211ENST00000560952 LINC00518Q8N0U6 118 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 GPR137CQ8N3F9 429 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 ZNF276Q8N554 614 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 SH2D3CQ8N5H7 860 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.47□□□□□ -2.01
RNF111-211ENST00000560952 PSD4Q8NDX1 1056 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 OR5T1Q8NG75 326 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 OR7D4Q8NG98 312 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 ELP5Q8TE02 316 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 TSEN15Q8WW01 171 aaKnown RBP2.47□□□□□ -2.01
RNF111-211ENST00000560952 HTR3CQ8WXA8 447 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 RLN3Q8WXF3 142 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 SNX19Q92543 992 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 LARP4BQ92615 738 aaKnown RBP2.47□□□□□ -2.01
RNF111-211ENST00000560952 SPSB4Q96A44 273 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 C14orf79Q96F83 325 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 NECTIN4Q96NY8 510 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 ZNF317Q96PQ6 595 aaPredicted RBP2.47□□□□□ -2.01
RNF111-211ENST00000560952 MMS19Q96T76 1030 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 PKP2Q99959 881 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 C11orf70Q9BRQ4 267 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 TUBB6Q9BUF5 446 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 TRIM31Q9BZY9 425 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 SEMA4CQ9C0C4 833 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 OR51V1Q9H2C8 321 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 MTIF3Q9H2K0 278 aaKnown RBP2.47□□□□□ -2.01
RNF111-211ENST00000560952 OR51B6Q9H340 312 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 TDRD3Q9H7E2 651 aaKnown RBP2.47□□□□□ -2.01
RNF111-211ENST00000560952 MANSC1Q9H8J5 431 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 NT5MQ9NPB1 228 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 ZDHHC4Q9NPG8 344 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.47□□□□□ -2.01
RNF111-211ENST00000560952 MBNL1Q9NR56 388 aaKnown RBP2.47□□□□□ -2.01
RNF111-211ENST00000560952 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.47□□□□□ -2.01
RNF111-211ENST00000560952 PARVAQ9NVD7 372 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 PANK4Q9NVE7 773 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 ARMC1Q9NVT9 282 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 NDUFAF4Q9P032 175 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 THEGQ9P2T0 379 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 TRPC4Q9UBN4 977 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 CHRNA9Q9UGM1 479 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 ZNHIT2Q9UHR6 403 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 TUBE1Q9UJT0 475 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 FBXW2Q9UKT8 454 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 RPH3ALQ9UNE2 315 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 GINS2Q9Y248 185 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 IFT52Q9Y366 437 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 PCDHGB1Q9Y5G3 927 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 MAU2Q9Y6X3 613 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 SALL3Q9BXA9 1300 aa2.47□□□□□ -2.01
RNF111-211ENST00000560952 ABCC11Q96J66 1382 aa2.46□□□□□ -2.01
RNF111-211ENST00000560952 TRBC2A0A5B9 178 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 MTMR11A4FU01 709 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 F8WDY8 70 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 SLC33A1O00400 549 aaPredicted RBP2.46□□□□□ -2.02
RNF111-211ENST00000560952 NR5A2O00482 541 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 RNASET2O00584 256 aaKnown RBP2.46□□□□□ -2.02
RNF111-211ENST00000560952 CTDSP2O14595 271 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 STX16O14662 325 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 HNRNPDLO14979 420 aaKnown RBP2.46□□□□□ -2.02
RNF111-211ENST00000560952 POLR1CO15160 346 aaPredicted RBP2.46□□□□□ -2.02
RNF111-211ENST00000560952 B4GALT2O60909 372 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 GPC4O75487 556 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 JRKO75564 520 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 RPS6KA5O75582 802 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 AGTP01019 485 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 KRT6BP04259 564 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 STSP08842 583 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 SPARCP09486 303 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 CD3GP09693 182 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 CALCBP10092 127 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 IL1R1P14778 569 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 HK1P19367 917 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 FUT1P19526 365 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 DRD5P21918 477 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 YWHAQP27348 245 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 CCND2P30279 289 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 HOXA9P31269 272 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 KIR3DL2P43630 455 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 GSTM5P46439 218 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 CSNK1DP48730 415 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 CEBPDP49716 269 aaPredicted RBP2.46□□□□□ -2.02
RNF111-211ENST00000560952 LIG4P49917 911 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 ZNF135P52742 658 aaPredicted RBP2.46□□□□□ -2.02
RNF111-211ENST00000560952 SUMO3P55854 103 aaPredicted RBP2.46□□□□□ -2.02
RNF111-211ENST00000560952 PER3P56645 1201 aa2.46□□□□□ -2.02
RNF111-211ENST00000560952 MAT1AQ00266 395 aaKnown RBP2.46□□□□□ -2.02
RNF111-211ENST00000560952 DMP1Q13316 513 aaPredicted RBP2.46□□□□□ -2.02
RNF111-211ENST00000560952 BOP1Q14137 746 aaKnown RBP2.46□□□□□ -2.02
RNF111-211ENST00000560952 PTPRRQ15256 657 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms