RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 SPATA31D1Q6ZQQ2 1576 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 EI24O14681 340 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 PMM2O15305 246 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 CLPXO76031 633 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 MT-CYBP00156 380 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 CYP11A1P05108 521 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 MMP3P08254 477 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 CD48P09326 243 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 POU2F1P14859 743 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 OR2B6P58173 313 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 C10orf82Q8WW14 230 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 FAM84AQ96KN4 292 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 TMEM209Q96SK2 561 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 FAM129BQ96TA1 746 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 EFCAB11Q9BUY7 163 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 FGFBP2Q9BYJ0 223 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 TMEM165Q9HC07 324 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 COMMD3Q9UBI1 195 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 SLC7A8Q9UHI5 535 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 MED31Q9Y3C7 131 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 FKBP7Q9Y680 259 aa12.98□□□□□ -0.33
CSPG4P11-201ENST00000560634 C9JVG2 144 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 TXNL4AP83876 142 aaKnown RBP12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 CNPY1Q3B7I2 92 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 RFWD3Q6PCD5 774 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 TMEM17Q86X19 198 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 KLHL36Q8N4N3 616 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 EMID1Q96A84 441 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 HMCESQ96FZ2 354 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 SLC4A9Q96Q91 983 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 KCNS3Q9BQ31 491 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 MKKSQ9NPJ1 570 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 ACSS2Q9NR19 701 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 DMAC2Q9NW81 257 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 CNTN3Q9P232 1028 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 FBXW2Q9UKT8 454 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 FZD10Q9ULW2 581 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 COQ4Q9Y3A0 265 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 IQGAP1P46940 1657 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 PLOD2O00469 737 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 ACOX3O15254 700 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 ITGA10O75578 1167 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 RNASEH2AO75792 299 aaKnown RBP12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 IFNA7P01567 189 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 EPHX1P07099 455 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 DNAJA1P31689 397 aaKnown RBP12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 RIPPLY1Q0D2K3 151 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 TUBA3CQ13748 450 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 PLA2G4EQ3MJ16 856 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 MINDY4Q4G0A6 757 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 UBXN11Q5T124 520 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 IDNKQ5T6J7 187 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 TUBA3EQ6PEY2 450 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 SDR16C5Q8N3Y7 309 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 OXR1Q8N573 874 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 FAM156AQ8NDB6 213 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 ZNF548Q8NEK5 533 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 OR10G2Q8NGC3 310 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 C2orf15Q8WU43 125 aaKnown RBP12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 DTLQ9NZJ0 730 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 SALL4Q9UJQ4 1053 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 GRIN2DO15399 1336 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 LILRA4P59901 499 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 HERVK_113P63132 956 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 TLR1Q15399 786 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 LINGO2Q7L985 606 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 FAM124AQ86V42 546 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 NIPA2Q8N8Q9 360 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 NTAN1Q96AB6 310 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 SCGB3A2Q96PL1 93 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 KXD1Q9BQD3 176 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 ERVK-6Q9BXR3 956 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 MLXQ9UH92 298 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 GTF2IRD1Q9UHL9 959 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 HEBP2Q9Y5Z4 205 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 PREX1Q8TCU6 1659 aa12.97□□□□□ -0.33
CSPG4P11-201ENST00000560634 A0A1W2PRB8 838 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 WNT7AO00755 349 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 TSPAN1O60635 241 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 KAT7O95251 611 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 AGR2O95994 175 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 RENP00797 406 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 ALPPP05187 535 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 DDX6P26196 483 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 SCNN1AP37088 669 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 DPYSL2Q16555 572 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 CRB2Q5IJ48 1285 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 TMEM220Q6QAJ8 160 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 C2orf73Q8N5S3 287 aaPredicted RBP12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 SLCO2A1Q92959 643 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 TUBGCP5Q96RT8 1024 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 HBEGFQ99075 208 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 CHMP1AQ9HD42 196 aaPredicted RBP12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 ITM2CQ9NQX7 267 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 ELOVL2Q9NXB9 296 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 PADI3Q9ULW8 664 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 SPIN1Q9Y657 262 aaPredicted RBP12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 LRRC72A6NJI9 287 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 MTPNP58546 118 aa12.96□□□□□ -0.33
CSPG4P11-201ENST00000560634 TUBA1BP68363 451 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms