RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 FDXRP22570 491 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 STX2P32856 288 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 CBSP35520 551 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 SKIV2L2P42285 1042 aaKnown RBP16.34■□□□□ 0.21
RPL28-209ENST00000560055 PPM1FP49593 454 aaPredicted RBP16.34■□□□□ 0.21
RPL28-209ENST00000560055 GABREP78334 506 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 KLHL38Q2WGJ6 581 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 C3orf38Q5JPI3 329 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 HECTD2Q5U5R9 776 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 FAM45BPQ6NSW5 357 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 CYHR1Q6ZMK1 362 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 RAB11FIP2Q7L804 512 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 PRSS42Q7Z5A4 293 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 AMIGO1Q86WK6 493 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 OOSP2Q86WS3 158 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 CFAP61Q8NHU2 1237 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 FAM45AQ8TCE6 357 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 FBF1Q8TES7 1133 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 CDKL2Q92772 493 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 ZDHHC12Q96GR4 267 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 TGM7Q96PF1 710 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 OLFM1Q99784 485 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 CMKLR1Q99788 373 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 SRMSQ9H3Y6 488 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 RHOJQ9H4E5 214 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 NINJ2Q9NZG7 142 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 TRMT6Q9UJA5 497 aaKnown RBP16.34■□□□□ 0.21
RPL28-209ENST00000560055 NFU1Q9UMS0 254 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 LOXL2Q9Y4K0 774 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 NBEAQ8NFP9 2946 aa16.34■□□□□ 0.21
RPL28-209ENST00000560055 ITPR1Q14643 2758 aa16.33■□□□□ 0.21
RPL28-209ENST00000560055 OR6C74A6NCV1 312 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 BTN3A3O00478 584 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 ILF2Q12905 390 aaKnown RBP16.33■□□□□ 0.2
RPL28-209ENST00000560055 KYNUQ16719 465 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 KBTBD12Q3ZCT8 623 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 UBAP2Q5T6F2 1119 aaKnown RBP16.33■□□□□ 0.2
RPL28-209ENST00000560055 UGT3A1Q6NUS8 523 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 CPNE9Q8IYJ1 553 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 ADGRF3Q8IZF5 1079 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 GPATCH11Q8N954 259 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 SKA2Q8WVK7 121 aaPredicted RBP16.33■□□□□ 0.2
RPL28-209ENST00000560055 CPNE1Q99829 537 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 FUT8Q9BYC5 575 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 CDC42EP4Q9H3Q1 356 aaKnown RBP16.33■□□□□ 0.2
RPL28-209ENST00000560055 XKR8Q9H6D3 395 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 ASCL3Q9NQ33 180 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 VWA7Q9Y334 891 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 ACACAQ13085 2346 aa16.33■□□□□ 0.2
RPL28-209ENST00000560055 MATN2O00339 956 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 BTN3A1O00481 513 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 KIF1CO43896 1103 aaKnown RBP16.32■□□□□ 0.2
RPL28-209ENST00000560055 BRINP1O60477 761 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 PSIP1O75475 530 aaKnown RBP16.32■□□□□ 0.2
RPL28-209ENST00000560055 TSPAN12O95859 305 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 MPC1LP0DKB6 136 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 HGFP14210 728 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 MCM3P25205 808 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 PKLRP30613 574 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 SHMT2P34897 504 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 GP5P40197 560 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 CCNFP41002 786 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 MLLT3P42568 568 aaPredicted RBP16.32■□□□□ 0.2
RPL28-209ENST00000560055 KPNA2P52292 529 aaKnown RBP16.32■□□□□ 0.2
RPL28-209ENST00000560055 SNAP47Q5SQN1 464 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 TEX35Q5T0J7 233 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 FAM208BQ5VWN6 2430 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 IRGCQ6NXR0 463 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 PAQR3Q6TCH7 311 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 FBXO39Q8N4B4 442 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 EIF1ADQ8N9N8 165 aaKnown RBP16.32■□□□□ 0.2
RPL28-209ENST00000560055 AGBL5Q8NDL9 886 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 MDM1Q8TC05 714 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 KLHL6Q8WZ60 621 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 VPS39Q96JC1 886 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 FOPNLQ96NB1 174 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 SLC46A1Q96NT5 459 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 CD180Q99467 661 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 ZNF768Q9H5H4 540 aaKnown RBP16.32■□□□□ 0.2
RPL28-209ENST00000560055 OR6C2Q9NZP2 312 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 KLHL3Q9UH77 587 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 POMT2Q9UKY4 750 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 PLAGL1Q9UM63 463 aa16.32■□□□□ 0.2
RPL28-209ENST00000560055 TDRKHQ9Y2W6 561 aaKnown RBP16.32■□□□□ 0.2
RPL28-209ENST00000560055 FAM95CA0A1B0GW59 222 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 TLCD2A6NGC4 264 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 A8MU76 341 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 ARHGEF33A8MVX0 844 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 GFYI3L273 518 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 KDM1AO60341 852 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 CCL4P13236 92 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 POLR2CP19387 275 aaPredicted RBP16.31■□□□□ 0.2
RPL28-209ENST00000560055 ITIH1P19827 911 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 CSTF2P33240 577 aaKnown RBP eCLIP16.31■□□□□ 0.2
RPL28-209ENST00000560055 DEKP35659 375 aaKnown RBP16.31■□□□□ 0.2
RPL28-209ENST00000560055 BDKRB1P46663 353 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 RAB28P51157 221 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 PGGT1BP53609 377 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 CYP4F3Q08477 520 aa16.31■□□□□ 0.2
RPL28-209ENST00000560055 NAB1Q13506 487 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms