RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 PSMG2Q969U7 264 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 GRIP2Q9C0E4 1043 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 RNF121Q9H920 327 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 TYRP14679 529 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 CTSKP43235 329 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 NEDD8Q15843 81 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 TMEM234Q8WY98 164 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 SCGB3A2Q96PL1 93 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 TRNT1Q96Q11 434 aaKnown RBP8.21□□□□□ -1.09
CHD8-213ENST00000557364 RNF186Q9NXI6 227 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 TSC22D4Q9Y3Q8 395 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 PCDHAC2Q9Y5I4 1007 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 LOC100506127A0A0U1RQW1 187 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 LOC110117498-PIK3R3F6TDL0 507 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 PSMD11O00231 422 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 HMGN1P05114 100 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 ZSCAN5DPP0CG00 497 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 GSTM3P21266 225 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 ZNF41P51814 821 aaPredicted RBP8.21□□□□□ -1.09
CHD8-213ENST00000557364 RING1Q06587 406 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 TPRG1Q6ZUI0 275 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 TREML1Q86YW5 311 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 C10orf107Q8IVU9 208 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 OR56A1Q8NGH5 318 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 PIK3R3Q92569 461 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 TBATAQ96M53 351 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 MRM3Q9HC36 420 aaKnown RBP8.21□□□□□ -1.09
CHD8-213ENST00000557364 COQ4Q9Y3A0 265 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 ZNF142P52746 1687 aaPredicted RBP8.21□□□□□ -1.09
CHD8-213ENST00000557364 AP5Z1O43299 807 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 SYNGR4O95473 234 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 GSRP00390 522 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 HAPLN1P10915 354 aaPredicted RBP8.21□□□□□ -1.09
CHD8-213ENST00000557364 ATXN1P54253 815 aaKnown RBP8.21□□□□□ -1.09
CHD8-213ENST00000557364 TAS2R40P59535 323 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 FCHO2Q0JRZ9 810 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 FUT2Q10981 343 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 CCINQ13939 588 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 SPATS1Q496A3 300 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.21□□□□□ -1.09
CHD8-213ENST00000557364 ZCCHC10Q8TBK6 192 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 PLGRKTQ9HBL7 147 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 RNF19AQ9NV58 838 aa8.21□□□□□ -1.09
CHD8-213ENST00000557364 PLIN3O60664 434 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 SDC2P34741 201 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 MFSD5Q6N075 450 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 CAND1Q86VP6 1230 aaKnown RBP8.21□□□□□ -1.1
CHD8-213ENST00000557364 ZZZ3Q8IYH5 903 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 FAM174AQ8TBP5 190 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 TSSK3Q96PN8 268 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 KCNH6Q9H252 994 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 EHD3Q9NZN3 535 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 SIRPGQ9P1W8 387 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 P2RX2Q9UBL9 471 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 AOC2O75106 756 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 IGHEP01854 428 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 TXNL4AP83876 142 aaKnown RBP8.21□□□□□ -1.1
CHD8-213ENST00000557364 TMEM126BQ8IUX1 230 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 ZNF567Q8N184 647 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 SGCDQ92629 289 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 C7orf26Q96N11 449 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 LRRC4CQ9HCJ2 640 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 PCDHGC4Q9Y5F7 938 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 C2orf74A8MZ97 194 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 SMNDC1O75940 238 aaKnown RBP eCLIP8.21□□□□□ -1.12e-27■■■■■ 27.9
CHD8-213ENST00000557364 MT-CYBP00156 380 aaPredicted RBP8.21□□□□□ -1.1
CHD8-213ENST00000557364 ATP1B2P14415 290 aaPredicted RBP8.21□□□□□ -1.1
CHD8-213ENST00000557364 ZNF3P17036 446 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 ALOX12P18054 663 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 TIGD2Q4W5G0 525 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 CLEC20AQ6ZU45 233 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 PHOSPHO2Q8TCD6 241 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 SAGE1Q9NXZ1 904 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 ITGB1BP2Q9UKP3 347 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 TEX13CA0A0J9YWL9 993 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 DCLK1O15075 740 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 RGS20O76081 388 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 HNRNPKP61978 463 aaKnown RBP eCLIP8.21□□□□□ -1.14e-6■■■■□ 20.5
CHD8-213ENST00000557364 ELAVL3Q14576 367 aaKnown RBP8.21□□□□□ -1.1
CHD8-213ENST00000557364 SYT16Q17RD7 645 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 FRRS1Q6ZNA5 592 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 CCDC36Q8IYA8 594 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 SIDT2Q8NBJ9 832 aaKnown RBP8.21□□□□□ -1.1
CHD8-213ENST00000557364 IGSF21Q96ID5 467 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 B3GALT6Q96L58 329 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 C1orf74Q96LT6 269 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 ASPNQ9BXN1 380 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 GKN1Q9NS71 199 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 ING4Q9UNL4 249 aa8.21□□□□□ -1.1
CHD8-213ENST00000557364 ARFGEF2Q9Y6D5 1785 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 SLC30A4O14863 429 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 HNRNPLP14866 589 aaKnown RBP eCLIP8.2□□□□□ -1.1
CHD8-213ENST00000557364 IL12AP29459 219 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 HNF1BP35680 557 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 RPS9P46781 194 aaKnown RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 RAPSNQ13702 412 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 TRIM25Q14258 630 aaKnown RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 JOSD2Q8TAC2 188 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 GPC6Q9Y625 555 aaPredicted RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 DNMT3AQ9Y6K1 912 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms