RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 RPA4Q13156 261 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 MSLNQ13421 630 aaPredicted RBP7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 DNASE1L3Q13609 305 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 ITIH4Q14624 930 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 KCNAB1Q14722 419 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 RPS6KA1Q15418 735 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 SYTL3Q4VX76 610 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 CAPRIN2Q6IMN6 1127 aaKnown RBP7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 TMEM126BQ8IUX1 230 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 LILRA3Q8N6C8 439 aaPredicted RBP7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 CCDC89Q8N998 374 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 OR4E2Q8NGC2 313 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 OR52K1Q8NGK4 314 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 OR8K5Q8NH50 307 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 MAIP1Q8WWC4 291 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 ATG4AQ8WYN0 398 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 SEC14L1Q92503 715 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 TFGQ92734 400 aaPredicted RBP7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 RNF31Q96EP0 1072 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 C16orf45Q96MC5 204 aaPredicted RBP7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 TSSK1BQ9BXA7 367 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 MVB12BQ9H7P6 319 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 LHX9Q9NQ69 397 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 C1GALT1Q9NS00 363 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 TRMT1Q9NXH9 659 aaKnown RBP7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 PAK5Q9P286 719 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 CROTQ9UKG9 612 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 POLHQ9Y253 713 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 MRPS18BQ9Y676 258 aaKnown RBP7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 CAPN6Q9Y6Q1 641 aa7.48□□□□□ -1.21
HNRNPC-226ENST00000556628 AHCTF1Q8WYP5 2266 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 A0A0U1RQJ8 604 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 TCRBV7S2A1N4TA0A589 114 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 PIPSLA2A3N6 862 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CCDC78A2IDD5 438 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 USP27XA6NNY8 438 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 C2orf74A8MZ97 194 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 MKRN2OSH3BPM6 223 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 AP3B1O00203 1094 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 LIASO43766 372 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CPNE3O75131 537 aaKnown RBP7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CREG1O75629 220 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 WISP1O95388 367 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 TIAF1O95411 115 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 RECKO95980 971 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 NTRK1P04629 796 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 PRSS56P0CW18 603 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CDKN1CP49918 316 aaPredicted RBP7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 KPNA2P52292 529 aaKnown RBP7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 TUBB4BP68371 445 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 PRAMEP78395 509 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 NFKB2Q00653 900 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 TUBB2AQ13885 445 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 ERV3-1Q14264 604 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 BRD3Q15059 726 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 GPR19Q15760 415 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CCDC38Q502W7 563 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 FASTKD1Q53R41 847 aaKnown RBP7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 COX20Q5RI15 118 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 PWWP2BQ6NUJ5 590 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 AFTPHQ6ULP2 937 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CERS6Q6ZMG9 384 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 NLRP9Q7RTR0 991 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 AMIGO1Q86WK6 493 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 SLC13A5Q86YT5 568 aaPredicted RBP7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 ALDH16A1Q8IZ83 802 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 D2HGDHQ8N465 521 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CLDN19Q8N6F1 224 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 PHC3Q8NDX5 983 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 PPHLN1Q8NEY8 458 aaKnown RBP7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 OR6P1Q8NGX9 317 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 KIF18AQ8NI77 898 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CT55Q8WUE5 264 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 C1orf54Q8WWF1 131 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CPT1BQ92523 772 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 ELMO1Q92556 727 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 N4BP2L2Q92802 583 aaPredicted RBP7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CLIP3Q96DZ5 547 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 HGH1Q9BTY7 390 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 TUBB2BQ9BVA1 445 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 PHACTR1Q9C0D0 580 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 TWSG1Q9GZX9 223 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 OR52A5Q9H2C5 316 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 TFB2MQ9H5Q4 396 aaKnown RBP7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CLMPQ9H6B4 373 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 SYTL2Q9HCH5 934 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 LATS2Q9NRM7 1088 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 PIH1D1Q9NWS0 290 aaKnown RBP7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 POLG2Q9UHN1 485 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 SERTAD3Q9UJW9 196 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 POMT2Q9UKY4 750 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 RIMKLBQ9ULI2 386 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 ASF1AQ9Y294 204 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 BTRCQ9Y297 605 aa7.47□□□□□ -1.21
HNRNPC-226ENST00000556628 CCDC162PA2VCL2 907 aa7.46□□□□□ -1.22
HNRNPC-226ENST00000556628 MROH6A6NGR9 719 aa7.46□□□□□ -1.22
HNRNPC-226ENST00000556628 OR51F1A6NGY5 319 aa7.46□□□□□ -1.22
HNRNPC-226ENST00000556628 SLC9B1P1A6NJY1 282 aa7.46□□□□□ -1.22
HNRNPC-226ENST00000556628 SUV39H1O43463 412 aa7.46□□□□□ -1.22
HNRNPC-226ENST00000556628 SUN1O94901 812 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms