RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ZNF423Q2M1K9 1284 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 METTL2BQ6P1Q9 378 aaKnown RBP10.92□□□□□ -0.66
SHMT2-220ENST00000555634 C16orf46Q6P387 395 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 KLHL35Q6PF15 583 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 SBSNQ6UWP8 590 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 TMEM207Q6UWW9 146 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 ABRAXAS1Q6UWZ7 409 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 ISCA2Q86U28 154 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 VRK3Q8IV63 474 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 HOMEZQ8IX15 550 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 AFAP1L2Q8N4X5 818 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 LILRA3Q8N6C8 439 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-220ENST00000555634 PDPRQ8NCN5 879 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 FBXO15Q8NCQ5 510 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-220ENST00000555634 ZFPM2Q8WW38 1151 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 PTERQ96BW5 349 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-220ENST00000555634 GAREM1Q9H706 876 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 PRDM8Q9NQV8 689 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 TMEM74BQ9NUR3 256 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 SLC17A7Q9P2U7 560 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 TBC1D29Q9UFV1 150 aa10.92□□□□□ -0.66
SHMT2-220ENST00000555634 ARHGEF33A8MVX0 844 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 STX16-NPEPL1H3BU86 382 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 GFYI3L273 518 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 UBXN8O00124 270 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 MYO1CO00159 1063 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 STX16O14662 325 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 POLR3GO15318 223 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-220ENST00000555634 SDC3O75056 442 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 LRP3O75074 770 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 KATNA1O75449 491 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 TOP3BO95985 862 aaKnown RBP10.91□□□□□ -0.66
SHMT2-220ENST00000555634 CREB1P16220 341 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 GRK2P25098 689 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 SERPINB5P36952 375 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 RXRGP48443 463 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 DLG1Q12959 904 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 C1orf61Q13536 156 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 ARHGAP19Q14CB8 494 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 NAA25Q14CX7 972 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 RPE65Q16518 533 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 PFKFB4Q16877 469 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 HLA-BQ31612 363 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 ZNF658BQ4V348 819 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-220ENST00000555634 THEMIS2Q5TEJ8 643 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 ANKS6Q68DC2 871 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 ARMC6Q6NXE6 501 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 ZCCHC8Q6NZY4 707 aaKnown RBP10.91□□□□□ -0.66
SHMT2-220ENST00000555634 CDHR3Q6ZTQ4 885 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 SH2D5Q6ZV89 423 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 SYTL1Q8IYJ3 562 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 ARL10Q8N8L6 244 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 PTGR2Q8N8N7 351 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-220ENST00000555634 OR6C4Q8NGE1 309 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 MED8Q96G25 268 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 ATOH8Q96SQ7 321 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 NSRP1Q9H0G5 558 aaKnown RBP10.91□□□□□ -0.66
SHMT2-220ENST00000555634 EML4Q9HC35 981 aaKnown RBP10.91□□□□□ -0.66
SHMT2-220ENST00000555634 CAPN10Q9HC96 672 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 MLXIPLQ9NP71 852 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 CCDC177Q9NQR7 707 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-220ENST00000555634 NLGN3Q9NZ94 848 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 OGFRQ9NZT2 677 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 OPTCQ9UBM4 332 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 PCYT1BQ9Y5K3 369 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-220ENST00000555634 CFAP20Q9Y6A4 193 aaKnown RBP10.91□□□□□ -0.66
SHMT2-220ENST00000555634 PCM1Q15154 2024 aa10.91□□□□□ -0.66
SHMT2-220ENST00000555634 A0A1B0GTQ1 180 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 OR52A4PA6NMU1 304 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 RHPN2P1A8MT19 583 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 A8MT66 165 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 TRIM13O60858 407 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 CRCPO75575 148 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 CCNDBP1O95273 360 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 C1orf105O95561 183 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 FUCA1P04066 466 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 BPGMP07738 259 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 ENGP17813 658 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 ACADLP28330 430 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 RAB28P51157 221 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 HERVK_113P63132 956 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 HHEXQ03014 270 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 PRKAA1Q13131 559 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 TSTA3Q13630 321 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-220ENST00000555634 PCLAFQ15004 111 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 SETDB1Q15047 1291 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 PDK4Q16654 411 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 PPP1R3AQ16821 1122 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 DEFB133Q30KQ1 61 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 C6orf132Q5T0Z8 1188 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 CAPRIN2Q6IMN6 1127 aaKnown RBP10.9□□□□□ -0.66
SHMT2-220ENST00000555634 CAPN13Q6MZZ7 669 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-220ENST00000555634 LRRC70Q7Z2Q7 622 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 CCNYL1Q8N7R7 359 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-220ENST00000555634 OR5AR1Q8NGP9 310 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 OR9A1PQ8NGU1 263 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 CCL4L1Q8NHW4 92 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 UBTD2Q8WUN7 234 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms