RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 HSP90AA5PQ58FG0 334 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 PRAMEF17Q5VTA0 474 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 KIAA1614Q5VZ46 1190 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 HIBCHQ6NVY1 386 aaPredicted RBP13.25□□□□□ -0.29
SNX6-203ENST00000555416 ARMC6Q6NXE6 501 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 CCDC81Q6ZN84 652 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 SYDE1Q6ZW31 735 aaPredicted RBP13.25□□□□□ -0.29
SNX6-203ENST00000555416 HOOK3Q86VS8 718 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 LRRC6Q86X45 466 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 FAM20CQ8IXL6 584 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 CACNA2D3Q8IZS8 1091 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 D2HGDHQ8N465 521 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 C2orf73Q8N5S3 287 aaPredicted RBP13.25□□□□□ -0.29
SNX6-203ENST00000555416 LINC01555Q8NAE3 123 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 SIDT2Q8NBJ9 832 aaKnown RBP13.25□□□□□ -0.29
SNX6-203ENST00000555416 GIMAP7Q8NHV1 300 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 IL17FQ96PD4 163 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 TEFMQ96QE5 360 aaKnown RBP13.25□□□□□ -0.29
SNX6-203ENST00000555416 TCF12Q99081 682 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 EBNA1BP2Q99848 306 aaKnown RBP13.25□□□□□ -0.29
SNX6-203ENST00000555416 ACTR10Q9NZ32 417 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 LOC101059948A0A1B0GTJ6 334 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 CCDC188H7C350 402 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 SPAG6O75602 509 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 HAUS5O94927 633 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 SEC31AO94979 1220 aaKnown RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 ZBTB11O95625 1053 aaPredicted RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 CHRM5P08912 532 aaPredicted RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 ERVK-10P10266 1014 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 FGF5P12034 268 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 PKMP14618 531 aaKnown RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 LIFP15018 202 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 UGT2B7P16662 529 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 PGAM1P18669 254 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 CDH3P22223 829 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 CASQ1P31415 396 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 BDKRB1P46663 353 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 UCNP55089 124 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 ADARP55265 1226 aaKnown RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 CYP4F2P78329 520 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 HSD11B2P80365 405 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 TUBB3Q13509 450 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 THOC5Q13769 683 aaKnown RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 COL9A2Q14055 689 aaPredicted RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 MORF4L2Q15014 288 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 ZIC1Q15915 447 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 DNAJC21Q5F1R6 531 aaKnown RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 ACSBG2Q5FVE4 666 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 MANEAQ5SRI9 462 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 PWWP2BQ6NUJ5 590 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 CNSTQ6PJW8 725 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 OTOAQ7RTW8 1153 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNX6-203ENST00000555416 SPATA4Q8NEY3 305 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 PANX3Q96QZ0 392 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 OR2A14Q96R47 310 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 TSSK1BQ9BXA7 367 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 PITPNM3Q9BZ71 974 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 ULBP3Q9BZM4 244 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 AKIRIN1Q9H9L7 192 aaPredicted RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 FGF21Q9NSA1 209 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 IARS2Q9NSE4 1012 aaKnown RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 INTS10Q9NVR2 710 aaKnown RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 RNF14Q9UBS8 474 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 FBXO5Q9UKT4 447 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 PCDHB11Q9Y5F2 797 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 PCDHGA4Q9Y5G9 962 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 SNRNP200O75643 2136 aaKnown RBP13.24□□□□□ -0.29
SNX6-203ENST00000555416 SPTBP11277 2137 aa13.24□□□□□ -0.29
SNX6-203ENST00000555416 PIPSLA2A3N6 862 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 F8W8V4 182 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 HCRTR1O43613 425 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 KIAA0754O94854 1291 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 ESR1P03372 595 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 F8A1P23610 371 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 GABRB3P28472 473 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 PKLRP30613 574 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 SHMT2P34897 504 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 ELK3P41970 407 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 CLCN7P51798 805 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 TIAL1Q01085 375 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNX6-203ENST00000555416 PRKAA1Q13131 559 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 IL11RAQ14626 422 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 FASTKD3Q14CZ7 662 aaKnown RBP13.23□□□□□ -0.29
SNX6-203ENST00000555416 TMED2Q15363 201 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 KYNUQ16719 465 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 PLEKHS1Q5SXH7 462 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 RNF187Q5TA31 235 aaPredicted RBP13.23□□□□□ -0.29
SNX6-203ENST00000555416 TRMT10BQ6PF06 316 aaKnown RBP13.23□□□□□ -0.29
SNX6-203ENST00000555416 PCGF5Q86SE9 256 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 KCNMB4Q86W47 210 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 KMT5CQ86Y97 462 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 GALNT6Q8NCL4 622 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 ZNF501Q96CX3 271 aaPredicted RBP13.23□□□□□ -0.29
SNX6-203ENST00000555416 RUNDC3BQ96NL0 473 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 TRAPPC9Q96Q05 1148 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 ZPBPQ9BS86 351 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 FAM60AQ9NP50 221 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 C1GALT1Q9NS00 363 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 SOHLH2Q9NX45 425 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms