RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 RAB11FIP5Q9BXF6 653 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 CNTNAP3Q9BZ76 1288 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 THSD1Q9NS62 852 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 TAS2R13Q9NYV9 303 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 SEMA5BQ9P283 1151 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 POMT2Q9UKY4 750 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 ICKQ9UPZ9 632 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 DHRS7Q9Y394 339 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 PSAT1Q9Y617 370 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 AK5Q9Y6K8 562 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 KMT2BQ9UMN6 2715 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 DSPP15924 2871 aaKnown RBP11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 PKD1L2Q7Z442 2459 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 MDC1Q14676 2089 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 CDRT15L2A8MXV6 281 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 BTN3A1O00481 513 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 RASSF9O75901 435 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 MATN4O95460 622 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 CBSLP0DN79 551 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 MPSTP25325 297 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 RBMS1P29558 406 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 ECHS1P30084 290 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 CBSP35520 551 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 GPX6P59796 221 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 PPP1CAP62136 330 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 CYP4F3Q08477 520 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 PRKAA1Q13131 559 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 PRKG2Q13237 762 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 NAB1Q13506 487 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 ACSBG2Q5FVE4 666 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 DNTTIP2Q5QJE6 756 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 SNAP47Q5SQN1 464 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 RBM20Q5T481 1227 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 FAM45BPQ6NSW5 357 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 ARMC6Q6NXE6 501 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 ZC3HC1Q86WB0 502 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 RELL1Q8IUW5 271 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 OR4E2Q8NGC2 313 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 SNIP1Q8TAD8 396 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 FAM45AQ8TCE6 357 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 SKA2Q8WVK7 121 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 UBXN4Q92575 508 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 INPP5DQ92835 1189 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 ZNF578Q96N58 590 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 SLC46A1Q96NT5 459 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 FMO2Q99518 471 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 SLC30A3Q99726 388 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 MCMBPQ9BTE3 642 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 B3GNT4Q9C0J1 378 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 TWSG1Q9GZX9 223 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 HRASLS2Q9NWW9 162 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 SIDT1Q9NXL6 827 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 OR6C2Q9NZP2 312 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 GALPQ9UBC7 116 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 PISDQ9UG56 409 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 KLHL3Q9UH77 587 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 TRMT6Q9UJA5 497 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 PCDHGA7Q9Y5G6 932 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 CFAP47Q6ZTR5 3102 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 CELSR3Q9NYQ7 3312 aa11.37□□□□□ -0.59
TRAFD1-209ENST00000552896 URB1O60287 2271 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 GSAPA4D1B5 854 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 FAM159BA6NKW6 160 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 C2orf74A8MZ97 194 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 B4E171 279 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 PSIP1O75475 530 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 TNFSF15O95150 251 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 C1QAP02745 245 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 TPBGLP0DKB5 382 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 MPC1LP0DKB6 136 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 HGFP14210 728 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 ITIH1P19827 911 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 FDXRP22570 491 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 TSPAN7P41732 249 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 SKIV2L2P42285 1042 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 ABCG1P45844 678 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 BDKRB1P46663 353 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 RAB28P51157 221 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 CDKN2DP55273 166 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 RAB15P59190 212 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 TIAL1Q01085 375 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 ABRQ12979 859 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 KYNUQ16719 465 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 KLHL38Q2WGJ6 581 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 CACHD1Q5VU97 1274 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 TTC23LQ6PF05 361 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 FOXR1Q6PIV2 292 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 FAM92BQ6ZTR7 304 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 C3orf62Q6ZUJ4 267 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 STRA8Q7Z7C7 330 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 PROSER1Q86XN7 944 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 FAM129CQ86XR2 697 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 KMT5CQ86Y97 462 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 ADGRF3Q8IZF5 1079 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 BMPERQ8N8U9 685 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 GPATCH11Q8N954 259 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 CFAP61Q8NHU2 1237 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 MAGEC3Q8TD91 643 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 KLHL6Q8WZ60 621 aa11.36□□□□□ -0.59
TRAFD1-209ENST00000552896 SLC41A2Q96JW4 573 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms