RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 IL22Q9GZX6 179 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 MRM3Q9HC36 420 aaKnown RBP12.61□□□□□ -0.39
NPAS3-209ENST00000551008 SOHLH2Q9NX45 425 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 ASF1AQ9Y294 204 aa12.61□□□□□ -0.39
NPAS3-209ENST00000551008 MDC1Q14676 2089 aaKnown RBP12.61□□□□□ -0.39
NPAS3-209ENST00000551008 UBR5O95071 2799 aaPredicted RBP12.61□□□□□ -0.39
NPAS3-209ENST00000551008 ASH1LQ9NR48 2969 aaKnown RBP12.6□□□□□ -0.39
NPAS3-209ENST00000551008 K7EM74 188 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 MATN2O00339 956 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 PRMT5O14744 637 aaPredicted RBP12.6□□□□□ -0.39
NPAS3-209ENST00000551008 CD3EAPO15446 510 aaKnown RBP12.6□□□□□ -0.39
NPAS3-209ENST00000551008 SCRG1O75711 98 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 SLCO2B1O94956 709 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 F7P08709 466 aaPredicted RBP12.6□□□□□ -0.39
NPAS3-209ENST00000551008 CHRM5P08912 532 aaPredicted RBP12.6□□□□□ -0.39
NPAS3-209ENST00000551008 TCN2P20062 427 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 AOAHP28039 575 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 PKLRP30613 574 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 NPY2RP49146 381 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 TERF1P54274 439 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 CDK16Q00536 496 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 PRKAA1Q13131 559 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 KCNAB2Q13303 367 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 IL10RAQ13651 578 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 TYSND1Q2T9J0 566 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 DEFB109BQ30KR1 87 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 PLEKHS1Q5SXH7 462 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 FAM69BQ5VUD6 431 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 ZNF385CQ66K41 422 aaPredicted RBP12.6□□□□□ -0.39
NPAS3-209ENST00000551008 C16orf46Q6P387 395 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 LRRC8BQ6P9F7 803 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 SPESP1Q6UW49 350 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 C4orf22Q6V702 233 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 BPHLQ86WA6 291 aaPredicted RBP12.6□□□□□ -0.39
NPAS3-209ENST00000551008 FAM20CQ8IXL6 584 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 SLC35F6Q8N357 371 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.6□□□□□ -0.39
NPAS3-209ENST00000551008 BIRC8Q96P09 236 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 CATSPER2Q96P56 530 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 ARHGAP9Q9BRR9 750 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 EFHD1Q9BUP0 239 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 ADNPQ9H2P0 1102 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 ACTL8Q9H568 366 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 GRPEL1Q9HAV7 217 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 KCND1Q9NSA2 647 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 IL1RAPL1Q9NZN1 696 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 CIDEBQ9UHD4 219 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 PADI1Q9ULC6 663 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 SOX13Q9UN79 622 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 KCNMB2Q9Y691 235 aa12.6□□□□□ -0.39
NPAS3-209ENST00000551008 SETXQ7Z333 2677 aaKnown RBP12.6□□□□□ -0.39
NPAS3-209ENST00000551008 PIPSLA2A3N6 862 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 C2orf74A8MZ97 194 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 GOLGA8KD6RF30 607 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 GOLGA8TH3BQL2 631 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 CPNE3O75131 537 aaKnown RBP12.59□□□□□ -0.39
NPAS3-209ENST00000551008 CREG1O75629 220 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 VAPBO95292 243 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 KRT14P02533 472 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 RPS3P23396 243 aaKnown RBP eCLIP12.59□□□□□ -0.39
NPAS3-209ENST00000551008 SHMT2P34897 504 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 MAGEA3P43357 314 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 ARL4DP49703 201 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 HSPA14Q0VDF9 509 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 GPS1Q13098 491 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 ERV3-1Q14264 604 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 GBX1Q14549 363 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 SYTL3Q4VX76 610 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 FAM198BQ6UWH4 519 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 GSTA5Q7RTV2 222 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 TMEM151BQ8IW70 566 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 DSELQ8IZU8 1212 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 C19orf47Q8N9M1 422 aaKnown RBP12.59□□□□□ -0.39
NPAS3-209ENST00000551008 OR8K5Q8NH50 307 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 LPGAT1Q92604 370 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 LRFN5Q96NI6 719 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 IL17FQ96PD4 163 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 SLC25A18Q9H1K4 315 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 CHST8Q9H2A9 424 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 PCMTD2Q9NV79 361 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 GALPQ9UBC7 116 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 TUBD1Q9UJT1 453 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 RUVBL2Q9Y230 463 aaKnown RBP12.59□□□□□ -0.39
NPAS3-209ENST00000551008 TDRKHQ9Y2W6 561 aaKnown RBP12.59□□□□□ -0.39
NPAS3-209ENST00000551008 JRKLQ9Y4A0 524 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 PCDHB3Q9Y5E6 796 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 NFS1Q9Y697 457 aa12.59□□□□□ -0.39
NPAS3-209ENST00000551008 FLNBO75369 2602 aaKnown RBP12.59□□□□□ -0.39
NPAS3-209ENST00000551008 C21orf140B9A014 251 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 TMEM150CB9EJG8 249 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 J3QKU1 62 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 ZNF185O15231 689 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 SUV39H1O43463 412 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 PRICKLE3O43900 615 aaPredicted RBP12.58□□□□□ -0.4
NPAS3-209ENST00000551008 KATNA1O75449 491 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 MT-ND3P03897 115 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 COILP38432 576 aaPredicted RBP12.58□□□□□ -0.4
NPAS3-209ENST00000551008 CCR10P46092 362 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 TTPAP49638 278 aa12.58□□□□□ -0.4
NPAS3-209ENST00000551008 KYNUQ16719 465 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms