RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 OR52B2Q96RD2 323 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 SLC22A4Q9H015 551 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 CXorf49A8MYA2 514 aaPredicted RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 FFAR2O15552 330 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 PI15O43692 258 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 SERPINA3P01011 423 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 SELPP16109 830 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 CCNFP41002 786 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 PDCD4Q53EL6 469 aaKnown RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 ANKRD23Q86SG2 305 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 GALNT13Q8IUC8 556 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 SMG8Q8ND04 991 aaKnown RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 ZMIZ2Q8NF64 920 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 ZNF516Q92618 1163 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 BHLHE41Q9C0J9 482 aaPredicted RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 COMMD4Q9H0A8 199 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 TBC1D24Q9ULP9 559 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 VIPP01282 170 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 SLC35G6P0C7Q6 338 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 TARDBPQ13148 414 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNC-212ENST00000542877 KLF1Q13351 362 aaPredicted RBP12.88□□□□□ -0.35
TNC-212ENST00000542877 ANO7Q6IWH7 933 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 SLITRK4Q8IW52 837 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 GPR135Q8IZ08 494 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 CLEC4CQ8WTT0 213 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 PIGKQ92643 395 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 CAMK1GQ96NX5 476 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 MAGEE1Q9HCI5 957 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 FNIP2Q9P278 1114 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 MKL2Q9ULH7 1088 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 ARL5AQ9Y689 179 aa12.88□□□□□ -0.35
TNC-212ENST00000542877 KLRG2A4D1S0 409 aaPredicted RBP12.87□□□□□ -0.35
TNC-212ENST00000542877 NEMP2A6NFY4 417 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 CLDN4O14493 209 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 NFATC1O95644 943 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 APODP05090 189 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 TUBA4AP68366 448 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 GPR33Q49SQ1 333 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 EIPR1Q53HC9 387 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 FAAH2Q6GMR7 532 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 FUT10Q6P4F1 479 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 EPGNQ6UW88 154 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 OXR1Q8N573 874 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 SLC22A17Q8WUG5 538 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 FUBP3Q96I24 572 aaKnown RBP eCLIP12.87□□□□□ -0.35
TNC-212ENST00000542877 ERMAPQ96PL5 475 aaPredicted RBP12.87□□□□□ -0.35
TNC-212ENST00000542877 CGREF1Q99674 301 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 IRAK2O43187 625 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 SRPRAP08240 638 aaKnown RBP12.87□□□□□ -0.35
TNC-212ENST00000542877 CRISP3P54108 245 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 GPX6P59796 221 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 ZCCHC12Q6PEW1 402 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 TMEM220Q6QAJ8 160 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 MOB2Q70IA6 237 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 LRP10Q7Z4F1 713 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 CPA6Q8N4T0 437 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 OSBPL2Q9H1P3 480 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 PTBP2Q9UKA9 531 aaKnown RBP12.87□□□□□ -0.35
TNC-212ENST00000542877 TLR6Q9Y2C9 796 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 ACOX3O15254 700 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 SPATA31D3P0C874 917 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 SPATS1Q496A3 300 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 FBXO43Q4G163 708 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 TIFABQ6ZNK6 161 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 SPATA31D4Q6ZUB0 917 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 TMEM110Q86TL2 294 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 OR10H4Q8NGA5 316 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 KAT2AQ92830 837 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 TP53INP1Q96A56 240 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 AASSQ9UDR5 926 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 FBXW2Q9UKT8 454 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 UGT1A6P19224 532 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 UGT1A1P22309 533 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 UGT1A4P22310 534 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 UGT1A3P35503 534 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 CHRNA4P43681 627 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 SCARB2Q14108 478 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 MSANTD2Q6P1R3 559 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 PAQR3Q6TCH7 311 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 NATD1Q8N6N6 113 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 STON2Q8WXE9 905 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 B3GALT6Q96L58 329 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 DNAAF2Q9NVR5 837 aaKnown RBP12.87□□□□□ -0.35
TNC-212ENST00000542877 ERVW-1Q9UQF0 538 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 TEX264Q9Y6I9 313 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 CPSF4LA6NMK7 179 aaKnown RBP12.87□□□□□ -0.35
TNC-212ENST00000542877 CAPN15O75808 1086 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 NFKB2Q00653 900 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 SLC30A6Q6NXT4 461 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 CHST4Q8NCG5 386 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 TMBIM1Q969X1 311 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 ACTR3BQ9P1U1 418 aa12.87□□□□□ -0.35
TNC-212ENST00000542877 PRKD3O94806 890 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 CAMK1Q14012 370 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 VARS2Q5ST30 1063 aaKnown RBP12.86□□□□□ -0.35
TNC-212ENST00000542877 IDNKQ5T6J7 187 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 PDSS2Q86YH6 399 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 CLIP4Q8N3C7 705 aa12.86□□□□□ -0.35
TNC-212ENST00000542877 PRICKLE1Q96MT3 831 aaPredicted RBP12.86□□□□□ -0.35
TNC-212ENST00000542877 MIPEPQ99797 713 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms