RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PPP1R8Q12972 351 aaKnown RBP9.47□□□□□ -0.89
CDH13-204ENST00000539548 DGUOKQ16854 277 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 ADPRMQ3LIE5 342 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 CTXN3Q4LDR2 81 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 LRIF1Q5T3J3 769 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 SHQ1Q6PI26 577 aaKnown RBP9.47□□□□□ -0.89
CDH13-204ENST00000539548 GLB1LQ6UWU2 654 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 GCNT7Q6ZNI0 430 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 NEK10Q6ZWH5 1172 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 EFHBQ8N7U6 833 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 TRPV1Q8NER1 839 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 MCOLN3Q8TDD5 553 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 NETO1Q8TDF5 533 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 ZFP90Q8TF47 636 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 RORBQ92753 470 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 SPATA17Q96L03 361 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDH13-204ENST00000539548 GABARAPL1Q9H0R8 117 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 NSUN3Q9H649 340 aaKnown RBP9.47□□□□□ -0.89
CDH13-204ENST00000539548 C1orf109Q9NX04 203 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 ERVK-18Q9QC07 812 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 TPRKBQ9Y3C4 175 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 OARD1Q9Y530 152 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 VWA8A3KMH1 1905 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 A0A096LPI6 279 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 ILVBLA1L0T0 632 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 TRIM43BA6NCK2 446 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 SYN3O14994 580 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 AXIN1O15169 862 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 XPNPEP2O43895 674 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 TLR5O60602 858 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 ULK1O75385 1050 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 SEC22BO75396 215 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 ANGPTL1O95841 491 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 SERPINA1P01009 418 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 CD6P30203 668 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 GRK3P35626 688 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 MAGEA2P43356 314 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 SERPINB10P48595 397 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 IL5RAQ01344 420 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 VAC14Q08AM6 782 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 RAPSNQ13702 412 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 MRPL58Q14197 206 aaKnown RBP9.46□□□□□ -0.89
CDH13-204ENST00000539548 NPTX1Q15818 432 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 SYT6Q5T7P8 510 aaPredicted RBP9.46□□□□□ -0.89
CDH13-204ENST00000539548 CPZQ66K79 652 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 CERS6Q6ZMG9 384 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 LRRC8DQ7L1W4 858 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 ABI1Q8IZP0 508 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 MFSD4AQ8N468 514 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 KRTCAP2Q8N6L1 136 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 NAT16Q8N8M0 369 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 OR6Q1Q8NGQ2 317 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 CNIH3Q8TBE1 160 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 PHF10Q8WUB8 498 aaKnown RBP9.46□□□□□ -0.89
CDH13-204ENST00000539548 NCLNQ969V3 563 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 FAM120BQ96EK7 910 aaKnown RBP9.46□□□□□ -0.89
CDH13-204ENST00000539548 REXO5Q96IC2 774 aaKnown RBP9.46□□□□□ -0.89
CDH13-204ENST00000539548 CPPED1Q9BRF8 314 aaPredicted RBP9.46□□□□□ -0.89
CDH13-204ENST00000539548 NTMT1Q9BV86 223 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 FAM126AQ9BYI3 521 aaPredicted RBP9.46□□□□□ -0.89
CDH13-204ENST00000539548 CD244Q9BZW8 370 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 KCNH6Q9H252 994 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 ATP13A3Q9H7F0 1226 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 LRTM1Q9HBL6 345 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 TMEM165Q9HC07 324 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 EXD2Q9NVH0 621 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 IL17CQ9P0M4 197 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 TRPS1Q9UHF7 1281 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 FBXO10Q9UK96 956 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 ERVW-1Q9UQF0 538 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 MAN2B2Q9Y2E5 1009 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 TRIM17Q9Y577 477 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 ANGPTL3Q9Y5C1 460 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 PCDHB14Q9Y5E9 798 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 PCDHGA10Q9Y5H3 936 aa9.46□□□□□ -0.89
CDH13-204ENST00000539548 PLXNA4Q9HCM2 1894 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 OR6C75A6NL08 312 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 MANBAO00462 879 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 FFAR3O14843 346 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 WNT9AO14904 365 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 GPR42O15529 346 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 MRPS14O60783 128 aaKnown RBP9.46□□□□□ -0.9
CDH13-204ENST00000539548 CNOT3O75175 753 aaKnown RBP9.46□□□□□ -0.9
CDH13-204ENST00000539548 CLDN11O75508 207 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 ARHGEF15O94989 841 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 NADKO95544 446 aaPredicted RBP9.46□□□□□ -0.9
CDH13-204ENST00000539548 EOMESO95936 686 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 FTH1P02794 183 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 TGM1P22735 817 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 RPS3P23396 243 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDH13-204ENST00000539548 OR1G1P47890 313 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 RGS4P49798 205 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 FKBP1BP68106 108 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 PHC1P78364 1004 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 SLC35A2P78381 396 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 IFITM3Q01628 133 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 KEAP1Q14145 624 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 GTDC1Q4AE62 458 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 USP39Q53GS9 565 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms