RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 WASH2PQ6VEQ5 465 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 PIGWQ7Z7B1 504 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 SLC22A15Q8IZD6 547 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 OR6Y1Q8NGX8 325 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 ASZ1Q8WWH4 475 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 TMEM159Q96B96 161 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 TFB2MQ9H5Q4 396 aaKnown RBP16.81■□□□□ 0.28
CLN6-202ENST00000538696 TMEM9BQ9NQ34 198 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 WASH6PQ9NQA3 447 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 SCHIP1Q9P0W5 487 aaPredicted RBP16.81■□□□□ 0.28
CLN6-202ENST00000538696 TSR3Q9UJK0 312 aaKnown RBP16.81■□□□□ 0.28
CLN6-202ENST00000538696 PCOLCE2Q9UKZ9 415 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 ACSL5Q9ULC5 683 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 PSMD13Q9UNM6 376 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 PCDHGB2Q9Y5G2 931 aa16.81■□□□□ 0.28
CLN6-202ENST00000538696 COL5A1P20908 1838 aaPredicted RBP16.81■□□□□ 0.28
CLN6-202ENST00000538696 EP300Q09472 2414 aaPredicted RBP16.8■□□□□ 0.28
CLN6-202ENST00000538696 B4DGG1 531 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 CDC7O00311 574 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 ITM2AO43736 263 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 TRIM13O60858 407 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 LYPLA1O75608 230 aaPredicted RBP16.8■□□□□ 0.28
CLN6-202ENST00000538696 SLCO2B1O94956 709 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 SLC35G4P0C7Q5 338 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 F3P13726 295 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 ATP5F1P24539 256 aaPredicted RBP16.8■□□□□ 0.28
CLN6-202ENST00000538696 IL2P60568 153 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 ATP6V0D1P61421 351 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 OCRLQ01968 901 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 UAP1L1Q3KQV9 507 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 LIPMQ5VYY2 423 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 ABRAXAS1Q6UWZ7 409 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 PIWIL4Q7Z3Z4 852 aaKnown RBP16.8■□□□□ 0.28
CLN6-202ENST00000538696 PDZD3Q86UT5 571 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 NAGSQ8N159 534 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 FAM46DQ8NEK8 389 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 SPDYE1Q8NFV5 336 aaPredicted RBP16.8■□□□□ 0.28
CLN6-202ENST00000538696 ZDHHC1Q8WTX9 485 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 EEF1AKMT1Q8WVE0 214 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 PATE1Q8WXA2 126 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 EXT2Q93063 718 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 THOC1Q96FV9 657 aaKnown RBP16.8■□□□□ 0.28
CLN6-202ENST00000538696 GATA5Q9BWX5 397 aaPredicted RBP16.8■□□□□ 0.28
CLN6-202ENST00000538696 C20orf27Q9GZN8 174 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 DPEP2Q9H4A9 486 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 ACSS2Q9NR19 701 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 NLGN3Q9NZ94 848 aa16.8■□□□□ 0.28
CLN6-202ENST00000538696 ANKRD12Q6UB98 2062 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 A8MT66 165 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 TRIM38O00635 465 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 GDF9O60383 454 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 NOBOXO60393 691 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 SNX3O60493 162 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 FOXD2O60548 495 aaPredicted RBP16.79■□□□□ 0.28
CLN6-202ENST00000538696 ARRB2P32121 409 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 PLOD1Q02809 727 aaPredicted RBP16.79■□□□□ 0.28
CLN6-202ENST00000538696 CLCA4Q14CN2 919 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 TSNQ15631 228 aaKnown RBP16.79■□□□□ 0.28
CLN6-202ENST00000538696 C6orf132Q5T0Z8 1188 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 CAPRIN2Q6IMN6 1127 aaKnown RBP16.79■□□□□ 0.28
CLN6-202ENST00000538696 FOXR1Q6PIV2 292 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 ATG14Q6ZNE5 492 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 SPATA21Q7Z572 469 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 OR4C6Q8NH72 309 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 KIAA1191Q96A73 305 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 SEC16BQ96JE7 1060 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 ATOH8Q96SQ7 321 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 INSM2Q96T92 566 aaPredicted RBP16.79■□□□□ 0.28
CLN6-202ENST00000538696 BTBD3Q9Y2F9 522 aa16.79■□□□□ 0.28
CLN6-202ENST00000538696 C4orf47A7E2U8 309 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 UBXN8O00124 270 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 EIF3FO00303 357 aaPredicted RBP16.78■□□□□ 0.28
CLN6-202ENST00000538696 BTN3A1O00481 513 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 GFRA3O60609 400 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 KERAO60938 352 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 H2AFYO75367 372 aaKnown RBP16.78■□□□□ 0.28
CLN6-202ENST00000538696 MPC1LP0DKB6 136 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 CBSLP0DN79 551 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 ENO3P13929 434 aaPredicted RBP16.78■□□□□ 0.28
CLN6-202ENST00000538696 ACADLP28330 430 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 CBSP35520 551 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 SLC1A6P48664 564 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 PRKAA2P54646 552 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 GKAP1Q5VSY0 366 aaPredicted RBP16.78■□□□□ 0.28
CLN6-202ENST00000538696 DUS1LQ6P1R4 473 aaKnown RBP16.78■□□□□ 0.28
CLN6-202ENST00000538696 OGFOD3Q6PK18 319 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 DBX2Q6ZNG2 339 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 EID2Q8N6I1 236 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 KYQ8NBH2 561 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 SREK1Q8WXA9 508 aaKnown RBP16.78■□□□□ 0.28
CLN6-202ENST00000538696 GRAMD1AQ96CP6 724 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 MOCOSQ96EN8 888 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 C7orf26Q96N11 449 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 SORT1Q99523 831 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 LAMA1P25391 3075 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 GOLGA4Q13439 2230 aaKnown RBP16.78■□□□□ 0.28
CLN6-202ENST00000538696 FAM186AA6NE01 2351 aa16.78■□□□□ 0.28
CLN6-202ENST00000538696 ERICH4A6NGS2 130 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 OR52A4PA6NMU1 304 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 TMEM114B3SHH9 223 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms