RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 HERC3Q15034 1050 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 RGL4Q8IZJ4 473 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 BHLHE22Q8NFJ8 381 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-205ENST00000538545 DNAJB14Q8TBM8 379 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 MAGEC3Q8TD91 643 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 UCMAQ8WVF2 138 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 ZNF570Q96NI8 536 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 ACTL8Q9H568 366 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 FZD3Q9NPG1 666 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 AIG1Q9NVV5 245 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 FADS3Q9Y5Q0 445 aa13.78□□□□□ -0.2
ACTN1-205ENST00000538545 GFYI3L273 518 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 ATG13O75143 517 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 RNASEH2AO75792 299 aaKnown RBP13.77□□□□□ -0.2
ACTN1-205ENST00000538545 PAPLNO95428 1278 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 SLC16A8O95907 504 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 ADSLP30566 484 aaPredicted RBP13.77□□□□□ -0.2
ACTN1-205ENST00000538545 GRIA2P42262 883 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 PRLHRP49683 370 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 SLC34A1Q06495 639 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 LPCAT4Q643R3 524 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 XKR5Q6UX68 686 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 TMEM184AQ6ZMB5 413 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 FAM83HQ6ZRV2 1179 aaPredicted RBP13.77□□□□□ -0.2
ACTN1-205ENST00000538545 KIRREL3Q8IZU9 778 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 HDDC3Q8N4P3 179 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 PROKR1Q8TCW9 393 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 CXorf40AQ8TE69 158 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 SLC25A23Q9BV35 468 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 SLC32A1Q9H598 525 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 ZNF576Q9H609 170 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 NMRK1Q9NWW6 199 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 PLAGL1Q9UM63 463 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 CCL27Q9Y4X3 112 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 AK5Q9Y6K8 562 aa13.77□□□□□ -0.2
ACTN1-205ENST00000538545 MAP3K7O43318 606 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 SLCO2B1O94956 709 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 PDYNP01213 254 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 FTH1P02794 183 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 APODP05090 189 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 CBSLP0DN79 551 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 IGFBP4P22692 258 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 CBSP35520 551 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 PFN3P60673 137 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 STX5Q13190 355 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 NAE1Q13564 534 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 DDX39BQ13838 428 aaKnown RBP13.77□□□□□ -0.21
ACTN1-205ENST00000538545 FLOT2Q14254 428 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 CST6Q15828 149 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 RABL3Q5HYI8 236 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 LDLRAP1Q5SW96 308 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 PLEKHS1Q5SXH7 462 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 AGBL4Q5VU57 503 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 LRRC74BQ6ZQY2 392 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 FAM124AQ86V42 546 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 IFNEQ86WN2 208 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 HEATR4Q86WZ0 1026 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 PHC3Q8NDX5 983 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 GANCQ8TET4 914 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 TMEM74Q96NL1 305 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 CCM2Q9BSQ5 444 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 NUSAP1Q9BXS6 441 aaKnown RBP13.77□□□□□ -0.21
ACTN1-205ENST00000538545 RDH14Q9HBH5 336 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 PRM3Q9NNZ6 103 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 SLC52A3Q9NQ40 469 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 HEBP1Q9NRV9 189 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 OBP2AQ9NY56 170 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 STX18Q9P2W9 335 aaKnown RBP13.77□□□□□ -0.21
ACTN1-205ENST00000538545 SLC23A2Q9UGH3 650 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 SLC22A2O15244 555 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 LILRB5O75023 590 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 CD22P20273 847 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 RPL10P27635 214 aaKnown RBP13.77□□□□□ -0.21
ACTN1-205ENST00000538545 HALP42357 657 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 ELP6Q0PNE2 266 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 FGL2Q14314 439 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 SLC2A7Q6PXP3 512 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 TRMT11Q7Z4G4 463 aaKnown RBP13.77□□□□□ -0.21
ACTN1-205ENST00000538545 KRTCAP2Q8N6L1 136 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 STON2Q8WXE9 905 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 SPDL1Q96EA4 605 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 PPP1R16AQ96I34 528 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 VPS35Q96QK1 796 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 S100A14Q9HCY8 104 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 EGFL7Q9UHF1 273 aa13.77□□□□□ -0.21
ACTN1-205ENST00000538545 CKAP5Q14008 2032 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 PCM1Q15154 2024 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 SLC5A10A0PJK1 596 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 FXYD1O00168 92 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 ULK1O75385 1050 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-205ENST00000538545 ERVK-8P63133 956 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 COL9A2Q14055 689 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-205ENST00000538545 ADGRE1Q14246 886 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 PON2Q15165 354 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 WSCD2Q2TBF2 565 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 SUSD1Q6UWL2 747 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 PLCD3Q8N3E9 789 aa13.76□□□□□ -0.21
ACTN1-205ENST00000538545 MCOLN3Q8TDD5 553 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms