RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 MTMR6Q9Y217 621 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 PIN4Q9Y237 131 aaKnown RBP4.01□□□□□ -1.77
SNHG1-203ENST00000537024 FAM96BQ9Y3D0 163 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 ATRQ13535 2644 aa4.01□□□□□ -1.77
SNHG1-203ENST00000537024 SDK2Q58EX2 2172 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 MYH9P35579 1960 aaKnown RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 TP53BP1Q12888 1972 aaPredicted RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 ARHGEF17Q96PE2 2063 aaPredicted RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 A0A0A0MQY5 61 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 A0A1W2PQ09 198 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 FAM157AC9JC47 383 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 GPAA1O43292 621 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 SLC25A17O43808 307 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 CSDE1O75534 798 aaKnown RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 TMCC1O94876 653 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 PRAMEF12O95522 483 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 PCNAP12004 261 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 SAT1P21673 171 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 U2AF2P26368 475 aaKnown RBP eCLIP4□□□□□ -1.772e-14■■■□□ 16.7
SNHG1-203ENST00000537024 OR1D2P34982 312 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 MATKP42679 507 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 ERVPABLB-1P60509 514 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 HSF1Q00613 529 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 BNC1Q01954 994 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 CEBPZQ03701 1054 aaKnown RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 TMEM119Q4V9L6 283 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 SYTL3Q4VX76 610 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 ALG10Q5BKT4 473 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 ALG10BQ5I7T1 473 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 CYP4A22Q5TCH4 519 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 GKAP1Q5VSY0 366 aaPredicted RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 AAGABQ6PD74 315 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 SLC36A4Q6YBV0 504 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 KRT74Q7RTS7 529 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 MRPL10Q7Z7H8 261 aaKnown RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 PRPF39Q86UA1 669 aaKnown RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 TBC1D26Q86UD7 250 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 DPP10Q8N608 796 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 METTL13Q8N6R0 699 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 ENGASEQ8NFI3 743 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 ZNF564Q8TBZ8 553 aaPredicted RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 MIB2Q96AX9 1013 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 MMABQ96EY8 250 aaPredicted RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 CDHR1Q96JP9 859 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 FAM20AQ96MK3 541 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 P2RY13Q9BPV8 354 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 POLR3CQ9BUI4 534 aaPredicted RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 TXLNGYQ9BZA5 131 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 GPR88Q9GZN0 384 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 SLITRK6Q9H5Y7 841 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 FAM124BQ9H5Z6 455 aaPredicted RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 GAREM1Q9H706 876 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 KIF9Q9HAQ2 790 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 MOV10Q9HCE1 1003 aaKnown RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 ASAH2Q9NR71 780 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 SLC6A13Q9NSD5 602 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 MTRRQ9UBK8 725 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 CARD8Q9Y2G2 431 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 AAR2Q9Y312 384 aaKnown RBP4□□□□□ -1.77
SNHG1-203ENST00000537024 SESN1Q9Y6P5 492 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 KNL1Q8NG31 2342 aa4□□□□□ -1.77
SNHG1-203ENST00000537024 IGKV6D-21A0A0A0MT36 114 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 A0A1W2PQF6 199 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 TYW5A2RUC4 315 aaKnown RBP3.99□□□□□ -1.77
SNHG1-203ENST00000537024 CBY3A6NI87 242 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 RHODO00212 210 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 AKAP8O43823 692 aaKnown RBP3.99□□□□□ -1.77
SNHG1-203ENST00000537024 RANBP6O60518 1105 aaKnown RBP3.99□□□□□ -1.77
SNHG1-203ENST00000537024 DKC1O60832 514 aaKnown RBP eCLIP3.99□□□□□ -1.772e-36■■□□□ 13.2
SNHG1-203ENST00000537024 ERAL1O75616 437 aaKnown RBP3.99□□□□□ -1.77
SNHG1-203ENST00000537024 NEURL1O76050 574 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 CLDN1O95832 211 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 TFP02787 698 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 HOXB5P09067 269 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 NHLRC4P0CG21 123 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-203ENST00000537024 CDK4P11802 303 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 PRF1P14222 555 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 GNSP15586 552 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 EDN2P20800 178 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 CDAP32320 146 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 UBA7P41226 1012 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 ACADVLP49748 655 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 HDAC4P56524 1084 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 TUBA4AP68366 448 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 OLIG2Q13516 323 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 RUNX3Q13761 415 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 ZNF268Q14587 947 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-203ENST00000537024 ZSCAN23Q3MJ62 389 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 RAB41Q5JT25 222 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 STXBP5Q5T5C0 1151 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 ZSCAN25Q6NSZ9 544 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 IL27RAQ6UWB1 636 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 ZNF813Q6ZN06 617 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 Q6ZPA2 131 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 FAM83HQ6ZRV2 1179 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-203ENST00000537024 KRT77Q7Z794 578 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 CEP57Q86XR8 500 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 TDRPQ86YL5 185 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 FAM185AQ8N0U4 392 aa3.99□□□□□ -1.77
SNHG1-203ENST00000537024 TRIML1Q8N9V2 468 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms