RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 IL17FQ96PD4 163 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 TEFMQ96QE5 360 aaKnown RBP12.76□□□□□ -0.37
PRKDC-206ENST00000536429 PANX3Q96QZ0 392 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 TCF12Q99081 682 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 EBNA1BP2Q99848 306 aaKnown RBP12.76□□□□□ -0.37
PRKDC-206ENST00000536429 MENTQ9BUN1 341 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 TSSK1BQ9BXA7 367 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 ACTR10Q9NZ32 417 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 MED16Q9Y2X0 877 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 PCDHB11Q9Y5F2 797 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 FAM169AQ9Y6X4 670 aa12.76□□□□□ -0.37
PRKDC-206ENST00000536429 LOC101059948A0A1B0GTJ6 334 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 F8W8V4 182 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 SEC31AO94979 1220 aaKnown RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 ZBTB11O95625 1053 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 ESR1P03372 595 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 CHRM5P08912 532 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 ERVK-10P10266 1014 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 FGF5P12034 268 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 PKMP14618 531 aaKnown RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 LIFP15018 202 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 PGAM1P18669 254 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 CDH3P22223 829 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 BDKRB1P46663 353 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 RPL21P46778 160 aaKnown RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 UCNP55089 124 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 ADARP55265 1226 aaKnown RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 TUBB3Q13509 450 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 THOC5Q13769 683 aaKnown RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 GBX1Q14549 363 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 MORF4L2Q15014 288 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 TMED2Q15363 201 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 GPR19Q15760 415 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 CCSMST1Q4G0I0 132 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 SOWAHCQ53LP3 525 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 DNAJC21Q5F1R6 531 aaKnown RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 PCSK4Q6UW60 755 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 CCDC81Q6ZN84 652 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 OTOAQ7RTW8 1153 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 PCGF5Q86SE9 256 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 FAM20CQ8IXL6 584 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 CACNA2D3Q8IZS8 1091 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 C2orf73Q8N5S3 287 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 LINC01555Q8NAE3 123 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 SPATA4Q8NEY3 305 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 GIMAP7Q8NHV1 300 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 SNRNP27Q8WVK2 155 aaKnown RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 RUNDC3BQ96NL0 473 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 ZPBPQ9BS86 351 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 PITPNM3Q9BZ71 974 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 ULBP3Q9BZM4 244 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 TWSG1Q9GZX9 223 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 IARS2Q9NSE4 1012 aaKnown RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 RNF14Q9UBS8 474 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 SNX24Q9Y343 169 aa12.75□□□□□ -0.37
PRKDC-206ENST00000536429 TMEM184BQ9Y519 407 aaPredicted RBP12.75□□□□□ -0.37
PRKDC-206ENST00000536429 ATRXP46100 2492 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 KALRNO60229 2985 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 RAD51CO43502 376 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 SPAG6O75602 509 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 KIAA0754O94854 1291 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 HAUS5O94927 633 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 UGT2B7P16662 529 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 CHRM3P20309 590 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 PKLRP30613 574 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 SHMT2P34897 504 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 ELK3P41970 407 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 ARL4DP49703 201 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 CLCN7P51798 805 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 CYP4F2P78329 520 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 HSD11B2P80365 405 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 COL9A2Q14055 689 aaPredicted RBP12.74□□□□□ -0.37
PRKDC-206ENST00000536429 IL11RAQ14626 422 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 FASTKD3Q14CZ7 662 aaKnown RBP12.74□□□□□ -0.37
PRKDC-206ENST00000536429 ZIC1Q15915 447 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 ACSBG2Q5FVE4 666 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 PLEKHS1Q5SXH7 462 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 PRAMEF17Q5VTA0 474 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 PWWP2BQ6NUJ5 590 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 CNSTQ6PJW8 725 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 TAX1BP1Q86VP1 789 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 KCNMB4Q86W47 210 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 KMT5CQ86Y97 462 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 RASGRP3Q8IV61 690 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 DCUN1D3Q8IWE4 304 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 NLGN4XQ8N0W4 816 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 IL22RA1Q8N6P7 574 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 GALNT6Q8NCL4 622 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 NLGN4YQ8NFZ3 816 aaPredicted RBP12.74□□□□□ -0.37
PRKDC-206ENST00000536429 CFAP36Q96G28 342 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 SNF8Q96H20 258 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 TRAPPC9Q96Q05 1148 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 OR2A14Q96R47 310 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 C1GALT1Q9NS00 363 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 FGF21Q9NSA1 209 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 INTS10Q9NVR2 710 aaKnown RBP12.74□□□□□ -0.37
PRKDC-206ENST00000536429 SOHLH2Q9NX45 425 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 POLG2Q9UHN1 485 aa12.74□□□□□ -0.37
PRKDC-206ENST00000536429 FBXO5Q9UKT4 447 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms