RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 RD3Q7Z3Z2 195 aa21.4■■□□□ 1.02
PACSIN3-209ENST00000532457 CCDC197Q8NCU1 140 aa21.4■■□□□ 1.02
PACSIN3-209ENST00000532457 MCOLN3Q8TDD5 553 aa21.4■■□□□ 1.02
PACSIN3-209ENST00000532457 LOXL4Q96JB6 756 aa21.4■■□□□ 1.02
PACSIN3-209ENST00000532457 SEMA4BQ9NPR2 832 aaPredicted RBP21.4■■□□□ 1.02
PACSIN3-209ENST00000532457 A0A0G2JND7 137 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 PRDX3P30048 256 aaKnown RBP21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 RPL14P50914 215 aaKnown RBP21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 PLOD1Q02809 727 aaPredicted RBP21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 PRKAA1Q13131 559 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 RPA4Q13156 261 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 TCEA2Q15560 299 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 ALG11Q2TAA5 492 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 GLIPR1L2Q4G1C9 344 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 VWA5B1Q5TIE3 1220 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 CUZD1Q86UP6 607 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 WDR75Q8IWA0 830 aaKnown RBP21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 CACNA2D3Q8IZS8 1091 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 CCL4L1Q8NHW4 92 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 MAPK15Q8TD08 544 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 RMDN2Q96LZ7 410 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 TIMM29Q9BSF4 260 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 CD244Q9BZW8 370 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 WWP1Q9H0M0 922 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 ZNF225Q9UK10 706 aa21.39■■□□□ 1.02
PACSIN3-209ENST00000532457 S100BP04271 92 aaPredicted RBP21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 ANXA5P08758 320 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 GNSP15586 552 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 CYP2A7P20853 494 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 RABIFP47224 123 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 AQP5P55064 265 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 GALNT1Q10472 559 aaPredicted RBP21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 PDZD3Q86UT5 571 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 PKP4Q99569 1192 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 TMEM120AQ9BXJ8 343 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 MIR1-1HGQ9H1L0 117 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 GPR27Q9NS67 375 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 SUSD2Q9UGT4 822 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 KLF15Q9UIH9 416 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 ARL2BPQ9Y2Y0 163 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 CFAP20Q9Y6A4 193 aaKnown RBP21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 USH1CQ9Y6N9 552 aa21.39■■□□□ 1.01
PACSIN3-209ENST00000532457 KNL1Q8NG31 2342 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 TNFRSF10CO14798 259 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 WNT1P04628 370 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 JUNP05412 331 aaKnown RBP21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 HIST1H2AGP0C0S8 130 aaPredicted RBP21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 HIST1H2ADP20671 130 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 HTR1BP28222 390 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 GGT5P36269 586 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 NBL1P41271 181 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 THOP1P52888 689 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 SRP54P61011 504 aaKnown RBP21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 DNAH14Q0VDD8 3507 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 CDKL4Q5MAI5 379 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 SH2D4BQ5SQS7 431 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 CAPRIN2Q6IMN6 1127 aaKnown RBP21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 LMNTD1Q8N9Z9 388 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 FAM174AQ8TBP5 190 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 UBTD2Q8WUN7 234 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 HIST1H2AHQ96KK5 128 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 NRTNQ99748 197 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 HIST1H2AJQ99878 128 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 EBF4Q9BQW3 602 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 H2AFJQ9BTM1 129 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 HGH1Q9BTY7 390 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 TRMOQ9BU70 441 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 TRIM54Q9BYV2 358 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 TMEM168Q9H0V1 697 aa21.38■■□□□ 1.01
PACSIN3-209ENST00000532457 MUC6Q6W4X9 2439 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 MATN2O00339 956 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 THEGLP0DJG4 465 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 KELP23276 732 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 ITPKAP23677 461 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 HOXD12P35452 270 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 CLCNKAP51800 687 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 FOXA1P55317 472 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 EIF2B5Q13144 721 aaKnown RBP21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 LAYNQ6UX15 382 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 GOLGA7Q7Z5G4 137 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 FOPNLQ96NB1 174 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 OR2M4Q96R27 311 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 TCEAL2Q9H3H9 227 aaPredicted RBP21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 OSGEPL1Q9H4B0 414 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 WWOXQ9NZC7 414 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 KLQ9UEF7 1012 aa21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 TNPO3Q9Y5L0 923 aaKnown RBP21.37■■□□□ 1.01
PACSIN3-209ENST00000532457 CATP04040 527 aaKnown RBP21.36■■□□□ 1.01
PACSIN3-209ENST00000532457 ALOX15P16050 662 aaPredicted RBP21.36■■□□□ 1.01
PACSIN3-209ENST00000532457 AK4P27144 223 aaPredicted RBP21.36■■□□□ 1.01
PACSIN3-209ENST00000532457 ARFIP2P53365 341 aa21.36■■□□□ 1.01
PACSIN3-209ENST00000532457 AP1S2P56377 157 aa21.36■■□□□ 1.01
PACSIN3-209ENST00000532457 RACK1P63244 317 aaKnown RBP21.36■■□□□ 1.01
PACSIN3-209ENST00000532457 CTBSQ01459 385 aa21.36■■□□□ 1.01
PACSIN3-209ENST00000532457 FZD2Q14332 565 aa21.36■■□□□ 1.01
PACSIN3-209ENST00000532457 CLCA4Q14CN2 919 aa21.36■■□□□ 1.01
PACSIN3-209ENST00000532457 LPAL2Q16609 132 aa21.36■■□□□ 1.01
PACSIN3-209ENST00000532457 ZNF542PQ5EBM4 170 aa21.36■■□□□ 1.01
PACSIN3-209ENST00000532457 LAIR1Q6GTX8 287 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms