RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 POLE2P56282 527 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 MC1RQ01726 317 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 DNASE1L3Q13609 305 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 DNAJC21Q5F1R6 531 aaKnown RBP20.85■□□□□ 0.93
HOXA3-204ENST00000521401 C16orf46Q6P387 395 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 CCDC137Q6PK04 289 aaKnown RBP20.85■□□□□ 0.93
HOXA3-204ENST00000521401 SPESP1Q6UW49 350 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 ZNF517Q6ZMY9 492 aaPredicted RBP20.85■□□□□ 0.93
HOXA3-204ENST00000521401 TRIM73Q86UV7 250 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 OR1L3Q8NH93 324 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 TRIM56Q9BRZ2 755 aaKnown RBP20.85■□□□□ 0.93
HOXA3-204ENST00000521401 MENTQ9BUN1 341 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 TSSK1BQ9BXA7 367 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 KLHL25Q9H0H3 589 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 SYTL2Q9HCH5 934 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 TRMT1Q9NXH9 659 aaKnown RBP20.85■□□□□ 0.93
HOXA3-204ENST00000521401 OR6C2Q9NZP2 312 aa20.85■□□□□ 0.93
HOXA3-204ENST00000521401 ZSCAN12O43309 604 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 CPNE3O75131 537 aaKnown RBP20.84■□□□□ 0.93
HOXA3-204ENST00000521401 NDUFS3O75489 264 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 FURINP09958 794 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 NFATC3Q12968 1075 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 GPS2Q13227 327 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 GRB7Q14451 532 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 ZIC1Q15915 447 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 TYSND1Q2T9J0 566 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 CTSL3PQ5NE16 218 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 PTRHD1Q6GMV3 140 aaKnown RBP20.84■□□□□ 0.93
HOXA3-204ENST00000521401 KIAA0930Q6ICG6 404 aaPredicted RBP20.84■□□□□ 0.93
HOXA3-204ENST00000521401 FAM199XQ6PEV8 388 aaPredicted RBP20.84■□□□□ 0.93
HOXA3-204ENST00000521401 CDHR3Q6ZTQ4 885 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 LRRC6Q86X45 466 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 TMEM126BQ8IUX1 230 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 MCUQ8NE86 351 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 LRFN5Q96NI6 719 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 BIRC8Q96P09 236 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 NAP1L3Q99457 506 aaPredicted RBP20.84■□□□□ 0.93
HOXA3-204ENST00000521401 ADNPQ9H2P0 1102 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 FAM60AQ9NP50 221 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 GNPTGQ9UJJ9 305 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 KCND3Q9UK17 655 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 SNX12Q9UMY4 172 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 PIKFYVEQ9Y2I7 2098 aa20.84■□□□□ 0.93
HOXA3-204ENST00000521401 COL6A6A6NMZ7 2263 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 C21orf140B9A014 251 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 ZNF185O15231 689 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 PHF2O75151 1096 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 KATNA1O75449 491 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 APOA4P06727 396 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 SFTPCP11686 197 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 MLNP12872 115 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 PKLRP30613 574 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 CCR10P46092 362 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 SARNPP82979 210 aaKnown RBP20.83■□□□□ 0.93
HOXA3-204ENST00000521401 KYNUQ16719 465 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 DEFB109BQ30KR1 87 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 PLEKHS1Q5SXH7 462 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 ARMC3Q5W041 872 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 LPGAT1Q92604 370 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 PANX3Q96QZ0 392 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 PCDHB3Q9Y5E6 796 aa20.83■□□□□ 0.93
HOXA3-204ENST00000521401 CFAP46Q8IYW2 2715 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 TMEM150CB9EJG8 249 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 CES2O00748 559 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 HCRTR1O43613 425 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 CREG1O75629 220 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 RECKO95980 971 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 RORAP35398 523 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 MAGEA3P43357 314 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 GABRA4P48169 554 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 EIF3BP55884 814 aaKnown RBP20.82■□□□□ 0.92
HOXA3-204ENST00000521401 ERV3-1Q14264 604 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 LCN10Q6JVE6 187 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 UNC5DQ6UXZ4 953 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 AGGF1Q8N302 714 aaeCLIP20.82■□□□□ 0.924e-16■□□□□ 8.5
HOXA3-204ENST00000521401 NAT8LQ8N9F0 302 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 C19orf47Q8N9M1 422 aaKnown RBP20.82■□□□□ 0.92
HOXA3-204ENST00000521401 LINC01555Q8NAE3 123 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 SERPINB12Q96P63 405 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 CHRNA10Q9GZZ6 450 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 SLC25A18Q9H1K4 315 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 FANCEQ9HB96 536 aa20.82■□□□□ 0.92
HOXA3-204ENST00000521401 H3BMH7 237 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 KIF5CO60282 957 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 FMO4P31512 558 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 FNTAP49354 379 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 RAB28P51157 221 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 KCNAB2Q13303 367 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 MRNIPQ6NTE8 343 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 CENPUQ71F23 418 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 SDCCAG8Q86SQ7 713 aaPredicted RBP20.81■□□□□ 0.92
HOXA3-204ENST00000521401 TMEM135Q86UB9 458 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 DCUN1D3Q8IWE4 304 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 OTUD6BQ8N6M0 293 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 LMNTD1Q8N9Z9 388 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 CFAP61Q8NHU2 1237 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 IL17FQ96PD4 163 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 TCF12Q99081 682 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 CHST8Q9H2A9 424 aa20.81■□□□□ 0.92
HOXA3-204ENST00000521401 PCMTD2Q9NV79 361 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms