RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 TMCO1Q9UM00 188 aa5.31□□□□□ -1.56
SCARNA16.4-201ENST00000516956 BTBD3Q9Y2F9 522 aa5.31□□□□□ -1.56
SCARNA16.4-201ENST00000516956 WDR37Q9Y2I8 494 aa5.31□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ANGPTL3Q9Y5C1 460 aa5.31□□□□□ -1.56
SCARNA16.4-201ENST00000516956 RNF215Q9Y6U7 377 aa5.31□□□□□ -1.56
SCARNA16.4-201ENST00000516956 TNRC6BQ9UPQ9 1833 aaKnown RBP5.31□□□□□ -1.56
SCARNA16.4-201ENST00000516956 FANCMQ8IYD8 2048 aa5.31□□□□□ -1.56
SCARNA16.4-201ENST00000516956 MYLKQ15746 1914 aa5.31□□□□□ -1.56
SCARNA16.4-201ENST00000516956 VCANP13611 3396 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 SCN8AQ9UQD0 1980 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 SPAARA0A1B0GVQ0 90 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 PIPSLA2A3N6 862 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 EME2A4GXA9 379 aaPredicted RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 FAM221BA6H8Z2 402 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 NPEPPSL1A6NEC2 478 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 LILRA5A6NI73 299 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 C2orf74A8MZ97 194 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 SUPT3HB4E1H0 165 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 GOLGA8RI6L899 631 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 GIPC1O14908 333 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 GLRA3O75311 464 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 SUPT3HO75486 399 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 KLHL2O95198 593 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 CCNDBP1O95273 360 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 C1orf105O95561 183 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 CPNE6O95741 557 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 EML2O95834 649 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 GUCA1CO95843 209 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 GSTA1P08263 222 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 TPBGLP0DKB5 382 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 PYGBP11216 843 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 MYF5P13349 255 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 JUPP14923 745 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 BRAFP15056 766 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ZNF37AP17032 561 aaPredicted RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 TYRP1P17643 537 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 POLR2CP19387 275 aaPredicted RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 TFEBP19484 476 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 CDH3P22223 829 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 CCND1P24385 295 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ACP1P24666 158 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ACADLP28330 430 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ARL1P40616 181 aaPredicted RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 BDKRB1P46663 353 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 GLRBP48167 497 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 RAB28P51157 221 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 PNLIPRP1P54315 467 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 OR1D5P58170 312 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 UBE2IP63279 158 aaKnown RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ASPHQ12797 758 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ZNF460Q14592 562 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 PUM1Q14671 1186 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ARHGAP19Q14CB8 494 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ACAP2Q15057 778 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 RASA2Q15283 850 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 SF1Q15637 639 aaKnown RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 CLPPQ16740 277 aaPredicted RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 SNAP47Q5SQN1 464 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 BEND6Q5SZJ8 279 aaPredicted RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 TMTC4Q5T4D3 741 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 PHF19Q5T6S3 580 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ANKS6Q68DC2 871 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 DUS1LQ6P1R4 473 aaKnown RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 GUSBP11Q6P575 273 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 CYB5D1Q6P9G0 228 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 DBX2Q6ZNG2 339 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 TIFABQ6ZNK6 161 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 RBM44Q6ZP01 1051 aaKnown RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 USP53Q70EK8 1073 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 KANSL1Q7Z3B3 1105 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 PIP4P1Q86T03 277 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ZNF761Q86XN6 746 aaPredicted RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 VRK3Q8IV63 474 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 CEP97Q8IW35 865 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 SRRM1Q8IYB3 904 aaKnown RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 GALNT15Q8N3T1 639 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 OR52E1Q8NGJ3 308 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 PPP1R14CQ8TAE6 165 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 PPP4R1Q8TF05 950 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 KCTD4Q8WVF5 259 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ASB11Q8WXH4 323 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 SMPDL3AQ92484 453 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ATP6V1E2Q96A05 226 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 MED8Q96G25 268 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 PDLIM5Q96HC4 596 aaKnown RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 TMEM74Q96NL1 305 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ZIM3Q96PE6 472 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 SLC30A3Q99726 388 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 TMEM109Q9BVC6 243 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 SLC12A9Q9BXP2 914 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 DERL2Q9GZP9 239 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 PCBD2Q9H0N5 130 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 LRRN3Q9H3W5 708 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 TFB2MQ9H5Q4 396 aaKnown RBP5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 XKR8Q9H6D3 395 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 ALG9Q9H6U8 611 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 KCNK9Q9NPC2 374 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 IRAK4Q9NWZ3 460 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 WWOXQ9NZC7 414 aa5.3□□□□□ -1.56
SCARNA16.4-201ENST00000516956 OR6C2Q9NZP2 312 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms