RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 MXRA8Q9BRK3 442 aa-1.07□□□□□ -2.58
RNU6-542P-201ENST00000516405 ZNF649Q9BS31 505 aa-1.07□□□□□ -2.58
RNU6-542P-201ENST00000516405 RBM24Q9BX46 236 aaKnown RBP-1.07□□□□□ -2.58
RNU6-542P-201ENST00000516405 SLC17A9Q9BYT1 436 aa-1.07□□□□□ -2.58
RNU6-542P-201ENST00000516405 OCR1Q9BZK8 76 aa-1.07□□□□□ -2.58
RNU6-542P-201ENST00000516405 C10orf88Q9H8K7 445 aa-1.07□□□□□ -2.58
RNU6-542P-201ENST00000516405 FANCLQ9NW38 375 aa-1.07□□□□□ -2.58
RNU6-542P-201ENST00000516405 ABI3Q9P2A4 366 aa-1.07□□□□□ -2.58
RNU6-542P-201ENST00000516405 IFT80Q9P2H3 777 aaPredicted RBP-1.07□□□□□ -2.58
RNU6-542P-201ENST00000516405 CRLS1Q9UJA2 301 aa-1.07□□□□□ -2.58
RNU6-542P-201ENST00000516405 SLC7A7Q9UM01 511 aa-1.07□□□□□ -2.58
RNU6-542P-201ENST00000516405 TNRQ92752 1358 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 ABCA4P78363 2273 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 DLG5Q8TDM6 1919 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 TRAV9-2A0A087WT02 112 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 A0A1B0GTH9 108 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 TMEM202A6NGA9 273 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 FAM90A26D6RGX4 464 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 PRSS46E5RG02 174 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 NPIPB9F8W1W9 429 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 K7EQD1 137 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 ANKRD28O15084 1053 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 ADAM12O43184 909 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 MED6O75586 246 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 CEACAM4O75871 244 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 DFFBO76075 338 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 SEMA4FO95754 770 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 VTNP04004 478 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 JAK1P23458 1154 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 RDXP35241 583 aaKnown RBP-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 GTF2F1P35269 517 aaKnown RBP eCLIP-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 KIR2DS2P43631 304 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 RXRGP48443 463 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 CTCFP49711 727 aaPredicted RBP-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 MNAT1P51948 309 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 CLDN2P57739 230 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 IL9RQ01113 521 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 EFTUD2Q15029 972 aaKnown RBP eCLIP-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 PRR4Q16378 134 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 TMEM44Q2T9K0 475 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 LETM2Q2VYF4 491 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 CCDC14Q49A88 953 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 PCOTHQ58A44 107 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 RAET1LQ5VY80 246 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 METTL2BQ6P1Q9 378 aaKnown RBP-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 CCDC174Q6PII3 467 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 APOA5Q6Q788 366 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 MAEAQ7L5Y9 396 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 CHD1LQ86WJ1 897 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 TTC30AQ86WT1 665 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 SLC35F3Q8IY50 421 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 PRSS35Q8N3Z0 413 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 GMCL1P1Q8NEA9 526 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 AENQ8WTP8 325 aaKnown RBP-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 EXOC4Q96A65 974 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 ZC3HAV1LQ96H79 300 aaKnown RBP-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 METTL2AQ96IZ6 378 aaKnown RBP-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 C8orf37Q96NL8 207 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 NDST4Q9H3R1 872 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 GPR108Q9NPR9 543 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 WSB2Q9NYS7 404 aaPredicted RBP-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 PKD2L2Q9NZM6 624 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 KIAA1456Q9P272 454 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 OPN4Q9UHM6 478 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 FBXO9Q9UK97 447 aaPredicted RBP-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 PIAS3Q9Y6X2 628 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 COL4A1P02462 1669 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 SCN2AQ99250 2005 aa-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 MYH14Q7Z406 1995 aaKnown RBP-1.08□□□□□ -2.58
RNU6-542P-201ENST00000516405 OTOGQ6ZRI0 2925 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 IGLV4-69A0A075B6H9 119 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 IGLV1-50A0A075B6I6 118 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ARHGEF33A8MVX0 844 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 TEX22C9J3V5 150 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 F8W8V4 182 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ENPP3O14638 875 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 BUD23O43709 281 aaKnown RBP-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 GCNT3O95395 438 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 PRAMEF12O95522 483 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 FTCDO95954 541 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 IGKV1-39P01597 117 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 IGKV1D-39P04432 117 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ANXA2P07355 339 aaKnown RBP-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 CKMT2P17540 419 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 IGFBP3P17936 291 aaPredicted RBP-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ATF3P18847 181 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ATP2B1P20020 1258 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 GABRB3P28472 473 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 RPS10P46783 165 aaKnown RBP-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 CACNG7P62955 275 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 IRX4P78413 519 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 GRIK3Q13003 919 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 SLAQ13239 276 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 RUNX2Q13950 521 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ZNF267Q14586 743 aaPredicted RBP-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ZNF674Q2M3X9 581 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ZNF506Q5JVG8 444 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 ZNF569Q5MCW4 686 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 LRRC8EQ6NSJ5 796 aa-1.09□□□□□ -2.58
RNU6-542P-201ENST00000516405 NOTUMQ6P988 496 aa-1.09□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms