RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SPATA21Q7Z572 469 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 SPRED1Q7Z699 444 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 CLEC14AQ86T13 490 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 LDB1Q86U70 411 aaPredicted RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 PIM3Q86V86 326 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 KCNMB4Q86W47 210 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 TRIM48Q8IWZ4 208 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 TRIM42Q8IWZ5 723 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 LMNTD2Q8IXW0 634 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 HM13Q8TCT9 377 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 NAT14Q8WUY8 206 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 ZFPM2Q8WW38 1151 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 ZNF669Q96BR6 464 aaPredicted RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 CXorf40BQ96DE9 158 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 MRRFQ96E11 262 aaKnown RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 CCDC97Q96F63 343 aaPredicted RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 CABS1Q96KC9 395 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 INSM2Q96T92 566 aaPredicted RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 GPR22Q99680 433 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 ELAC2Q9BQ52 826 aaKnown RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 RABEP2Q9H5N1 569 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 UCK1Q9HA47 277 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 KCNK4Q9NYG8 393 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 MARCH4Q9P2E8 410 aaPredicted RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 DCDC2Q9UHG0 476 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 WDR37Q9Y2I8 494 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 ARL2BPQ9Y2Y0 163 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 RRP15Q9Y3B9 282 aaKnown RBP8.13□□□□□ -1.11
CCL28-204ENST00000514421 BPTFQ12830 3046 aa8.13□□□□□ -1.11
CCL28-204ENST00000514421 CHD8Q9HCK8 2581 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 IGHV1OR21-1A0A087WYE8 117 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 CCT8L1PA6NM43 557 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 OR52A4PA6NMU1 304 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 GOLGA8RI6L899 631 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 LIN7AO14910 233 aaPredicted RBP8.12□□□□□ -1.11
CCL28-204ENST00000514421 GLRA3O75311 464 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 CSO75390 466 aaKnown RBP8.12□□□□□ -1.11
CCL28-204ENST00000514421 CPNE6O95741 557 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 FTH1P02794 183 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 MPOP05164 745 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 RPS3P23396 243 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCL28-204ENST00000514421 PBLDP30039 288 aaPredicted RBP8.12□□□□□ -1.11
CCL28-204ENST00000514421 SERPINB4P48594 390 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 GPLD1P80108 840 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 SEPT7Q16181 437 aaKnown RBP8.12□□□□□ -1.11
CCL28-204ENST00000514421 GALNTL6Q49A17 601 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 MROH9Q5TGP6 573 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 CAPRIN2Q6IMN6 1127 aaKnown RBP8.12□□□□□ -1.11
CCL28-204ENST00000514421 ZC3HC1Q86WB0 502 aaKnown RBP8.12□□□□□ -1.11
CCL28-204ENST00000514421 MARCH9Q86YJ5 346 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 OTUD6BQ8N6M0 293 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 GBP7Q8N8V2 638 aaPredicted RBP8.12□□□□□ -1.11
CCL28-204ENST00000514421 C2CD4AQ8NCU7 369 aaPredicted RBP8.12□□□□□ -1.11
CCL28-204ENST00000514421 OR6Y1Q8NGX8 325 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 OR10G6Q8NH81 332 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 LRRC8CQ8TDW0 803 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 ELMO1Q92556 727 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 AHCYL2Q96HN2 611 aaKnown RBP8.12□□□□□ -1.11
CCL28-204ENST00000514421 C7orf26Q96N11 449 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 TMEM74Q96NL1 305 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 DPYSL5Q9BPU6 564 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 TSSK1BQ9BXA7 367 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 PITPNM3Q9BZ71 974 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 NRSN2Q9GZP1 204 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 WWP1Q9H0M0 922 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 RHOJQ9H4E5 214 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 EPB41L1Q9H4G0 881 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 SYNDIG1Q9H7V2 258 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 MANSC1Q9H8J5 431 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 COG4Q9H9E3 785 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 SLC40A1Q9NP59 571 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 MLXIPLQ9NP71 852 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 C20orf96Q9NUD7 363 aaPredicted RBP8.12□□□□□ -1.11
CCL28-204ENST00000514421 POT1Q9NUX5 634 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 KLHL14Q9P2G3 628 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 EMCNQ9ULC0 261 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 PSMD13Q9UNM6 376 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 VPS9D1Q9Y2B5 631 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 COLEC10Q9Y6Z7 277 aa8.12□□□□□ -1.11
CCL28-204ENST00000514421 URB1O60287 2271 aaKnown RBP8.12□□□□□ -1.11
CCL28-204ENST00000514421 ZNF106Q9H2Y7 1883 aaKnown RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 ACACAQ13085 2346 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 SLC5A10A0PJK1 596 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 LILRA5A6NI73 299 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 GOLGA8TH3BQL2 631 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 IFRD1O00458 451 aaPredicted RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 KPNA5O15131 536 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 CASC3O15234 703 aaKnown RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 PLIN3O60664 434 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 SNNO75324 88 aaPredicted RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 S1PR4O95977 384 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 BPGMP07738 259 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 SLC35G4P0C7Q5 338 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 COL6A2P12110 1019 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 AMD1P17707 334 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 OGNP20774 298 aaKnown RBP8.11□□□□□ -1.11
CCL28-204ENST00000514421 NDUFS1P28331 727 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 FMO4P31512 558 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 LSSP48449 732 aa8.11□□□□□ -1.11
CCL28-204ENST00000514421 PPM1FP49593 454 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms