RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 SBSNQ6UWP8 590 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 ABRAXAS1Q6UWZ7 409 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 CYHR1Q6ZMK1 362 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 FBXO39Q8N4B4 442 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 ZNF548Q8NEK5 533 aaPredicted RBP10.59□□□□□ -0.71
PFDN1-204ENST00000512707 FAM46DQ8NEK8 389 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 OR5K2Q8NHB8 316 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 RAB3IL1Q8TBN0 382 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 MDM1Q8TC05 714 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 DENND1AQ8TEH3 1009 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 RAD51AP1Q96B01 352 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 RMDN2Q96LZ7 410 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 CCDC138Q96M89 665 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 FERD3LQ96RJ6 166 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 ATOH8Q96SQ7 321 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 RAB11FIP5Q9BXF6 653 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 MLXIPLQ9NP71 852 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 PRDM8Q9NQV8 689 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 UTP6Q9NYH9 597 aaKnown RBP10.59□□□□□ -0.71
PFDN1-204ENST00000512707 TBC1D29Q9UFV1 150 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 LNPEPQ9UIQ6 1025 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 EMCNQ9ULC0 261 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 PLEKHM1Q9Y4G2 1056 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 TNPO3Q9Y5L0 923 aaKnown RBP10.59□□□□□ -0.71
PFDN1-204ENST00000512707 CSNK1G3Q9Y6M4 447 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 DOCK9Q9BZ29 2069 aa10.59□□□□□ -0.71
PFDN1-204ENST00000512707 OTOGLQ3ZCN5 2332 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 CEP250Q9BV73 2442 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 PIKFYVEQ9Y2I7 2098 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 NCF1BA6NI72 391 aaPredicted RBP10.58□□□□□ -0.72
PFDN1-204ENST00000512707 PRR19A6NJB7 356 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 NCF1CA8MVU1 366 aaPredicted RBP10.58□□□□□ -0.72
PFDN1-204ENST00000512707 ARHGEF33A8MVX0 844 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 LMO7DNF2Z398 122 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 UBXN8O00124 270 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 ARHGAP33O14559 1287 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 PIAS2O75928 621 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 IPO13O94829 963 aaKnown RBP10.58□□□□□ -0.72
PFDN1-204ENST00000512707 C1orf105O95561 183 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 GUCA1CO95843 209 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 BPGMP07738 259 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 NCF1P14598 390 aaPredicted RBP10.58□□□□□ -0.72
PFDN1-204ENST00000512707 GRK2P25098 689 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 ACADLP28330 430 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 ETV4P43268 484 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 RXRGP48443 463 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 CCT8P50990 548 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 NFKB2Q00653 900 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 C1orf61Q13536 156 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 MPP2Q14168 576 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 PHKG1Q16816 387 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 PPP1R3AQ16821 1122 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 PFKFB4Q16877 469 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 ZNF423Q2M1K9 1284 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 LIPMQ5VYY2 423 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 ATG16L1Q676U5 607 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 SLC9B2Q86UD5 537 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 NRROSQ86YC3 692 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 RBM12BQ8IXT5 1001 aaKnown RBP10.58□□□□□ -0.72
PFDN1-204ENST00000512707 CCL4L1Q8NHW4 92 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 LRRC8CQ8TDW0 803 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 PPP4R1Q8TF05 950 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 ARRDC1-AS1Q9H2J1 176 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 TCEAL2Q9H3H9 227 aaPredicted RBP10.58□□□□□ -0.72
PFDN1-204ENST00000512707 C12orf65Q9H3J6 166 aaKnown RBP10.58□□□□□ -0.72
PFDN1-204ENST00000512707 CAPN10Q9HC96 672 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 POT1Q9NUX5 634 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 WWOXQ9NZC7 414 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 NCKIPSDQ9NZQ3 722 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 KLF15Q9UIH9 416 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 ADAMTS6Q9UKP5 1117 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 PNMA8BQ9ULN7 279 aaPredicted RBP10.58□□□□□ -0.72
PFDN1-204ENST00000512707 PDE10AQ9Y233 779 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 TDRKHQ9Y2W6 561 aaKnown RBP10.58□□□□□ -0.72
PFDN1-204ENST00000512707 DMXL1Q9Y485 3027 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 ABCA7Q8IZY2 2146 aa10.58□□□□□ -0.72
PFDN1-204ENST00000512707 WDR91A4D1P6 747 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 A8MT66 165 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 B4DGG1 531 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 TARM1B6A8C7 271 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 G3V2L1 256 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 STX16-NPEPL1H3BU86 382 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 STX16O14662 325 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 TRIM13O60858 407 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 SDC3O75056 442 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 SNUPNO95149 360 aaKnown RBP10.57□□□□□ -0.72
PFDN1-204ENST00000512707 VIPP01282 170 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 RETP07949 1114 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 DHRS4L1P0CG22 281 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 ALDH3A1P30838 453 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 SERPINB5P36952 375 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 MDH1P40925 334 aaKnown RBP10.57□□□□□ -0.72
PFDN1-204ENST00000512707 BDKRB1P46663 353 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 ID4P47928 161 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 PIK3CGP48736 1102 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 DNAJB13P59910 316 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 PCLAFQ15004 111 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 RPE65Q16518 533 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 HLA-BQ31612 363 aa10.57□□□□□ -0.72
PFDN1-204ENST00000512707 INAVAQ3KP66 663 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms