RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 DDNO94850 711 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 C9P02748 559 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 SAGP10523 405 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 CLUP10909 449 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 PI3P19957 117 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ITGA3P26006 1051 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ITPKBP27987 946 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ALDH4A1P30038 563 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 PPP2R1AP30153 589 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 MMP13P45452 471 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 NSFP46459 744 aaKnown RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 CXCR3P49682 368 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 SCNN1GP51170 649 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 PRRX1P54821 245 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 MFAP3P55082 362 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 GSDMDP57764 484 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ACTR3P61158 418 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 DLK1P80370 383 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 TNFRSF17Q02223 184 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 SLC34A1Q06495 639 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 DLX2Q07687 328 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 SPOCK1Q08629 439 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 NR1D2Q14995 579 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 HADHQ16836 314 aaKnown RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 CCDC142Q17RM4 750 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 TMEM63BQ5T3F8 832 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 NSUN5P2Q63ZY6 315 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 TPGS2Q68CL5 300 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ARMC6Q6NXE6 501 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 MIS18BP1Q6P0N0 1132 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 METTL2BQ6P1Q9 378 aaKnown RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 VWA1Q6PCB0 445 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 PRR23BQ6ZRT6 265 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 TMPRSS11FQ6ZWK6 438 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ERASQ7Z444 233 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 AMIGO1Q86WK6 493 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 PHC2Q8IXK0 858 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ADGRF4Q8IZF3 695 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 DSELQ8IZU8 1212 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 TTC5Q8N0Z6 440 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 EMC1Q8N766 993 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 HORMAD2Q8N7B1 307 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 GBP7Q8N8V2 638 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 MNS1Q8NEH6 495 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 OR52B4Q8NGK2 314 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 BBS10Q8TAM1 723 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 APBB2Q92870 758 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 CAVIN3Q969G5 261 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 LENG9Q96B70 501 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 DAZAP1Q96EP5 407 aaKnown RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 THOC1Q96FV9 657 aaKnown RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 METTL2AQ96IZ6 378 aaKnown RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ZNF607Q96SK3 696 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 SPAG8Q99932 426 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 AIFM2Q9BRQ8 373 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ATG101Q9BSB4 218 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 TRMT61BQ9BVS5 477 aaKnown RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 FSD1LQ9BXM9 530 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 GON7Q9BXV9 100 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 NACA2Q9H009 215 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 DPAGT1Q9H3H5 408 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 PPP1R3EQ9H7J1 279 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 MVB12BQ9H7P6 319 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ACTR8Q9H981 624 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ROPN1Q9HAT0 212 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 CDH20Q9HBT6 801 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 KCNMB3Q9NPA1 279 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 SERINC1Q9NRX5 453 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 GLRX2Q9NS18 164 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 PNPLA3Q9NST1 481 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ANKRD10Q9NXR5 420 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 DONSONQ9NYP3 566 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 PTGFRNQ9P2B2 879 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 RUVBL2Q9Y230 463 aaKnown RBP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 ZNF510Q9Y2H8 683 aa3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P22-201ENST00000505315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ZNF536O15090 1300 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 SPATA31A5Q5VU36 1347 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 SPATA31A6Q5VVP1 1343 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 SPATA31A7Q8IWB4 1347 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 ILVBLA1L0T0 632 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 A8MUI8 341 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 F8W810 466 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 H0YIZ8 118 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 H3BMM5 538 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 CYR61O00622 381 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PTGESO14684 152 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PSMD3O43242 534 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 B4GALT3O60512 393 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 UGDHO60701 494 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PRAF2O60831 178 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 FAM20BO75063 409 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 VPS26AO75436 327 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 RPS6KA5O75582 802 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 SURF6O75683 361 aaKnown RBP3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 SERPINA3P01011 423 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 KRT8P05787 483 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 PROS1P07225 676 aa3.52□□□□□ -1.85
HMGB1P22-201ENST00000505315 OR2T7P0C7T2 308 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms