RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 D2HGDHQ8N465 521 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 OTUD6BQ8N6M0 293 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 OR52E1Q8NGJ3 308 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 ZNF669Q96BR6 464 aaPredicted RBP14.89□□□□□ -0.03
NUP50-219ENST00000497960 STAMBPL1Q96FJ0 436 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 PWWP2AQ96N64 755 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 FCRL4Q96PJ5 515 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 KIFC1Q9BW19 673 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 FGF21Q9NSA1 209 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 SOHLH2Q9NX45 425 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 DMGDHQ9UI17 866 aaKnown RBP14.89□□□□□ -0.03
NUP50-219ENST00000497960 POMT2Q9UKY4 750 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 LOC400499M0QZD8 3231 aa14.89□□□□□ -0.03
NUP50-219ENST00000497960 LOC101059948A0A1B0GTJ6 334 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 SLC5A10A0PJK1 596 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 PRMT5O14744 637 aaPredicted RBP14.88□□□□□ -0.03
NUP50-219ENST00000497960 MAP3K7O43318 606 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 KDM1AO60341 852 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 NDUFS3O75489 264 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 MT-ND3P03897 115 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 CCNYL3P0C7X3 344 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 EBLN1P0CF75 366 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 ZNF28P17035 718 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 ITGB6P18564 788 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 ACADLP28330 430 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 NMBRP28336 390 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 CYP4F2P78329 520 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 COL9A2Q14055 689 aaPredicted RBP14.88□□□□□ -0.03
NUP50-219ENST00000497960 LY6DQ14210 128 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 ARMC3Q5W041 872 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 PTRHD1Q6GMV3 140 aaKnown RBP14.88□□□□□ -0.03
NUP50-219ENST00000497960 CES3Q6UWW8 571 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 NAPRTQ6XQN6 538 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 CENPUQ71F23 418 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 LDB1Q86U70 411 aaPredicted RBP14.88□□□□□ -0.03
NUP50-219ENST00000497960 TBC1D21Q8IYX1 336 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 UNC5BQ8IZJ1 945 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 GALNT6Q8NCL4 622 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 FBXO25Q8TCJ0 367 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 EXTL1Q92935 676 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 SLC45A3Q96JT2 553 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 SLC12A9Q9BXP2 914 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 C1GALT1Q9NS00 363 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 POLG2Q9UHN1 485 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 CHMP2BQ9UQN3 213 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 RPS6KL1Q9Y6S9 549 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 SPTA1P02549 2419 aa14.88□□□□□ -0.03
NUP50-219ENST00000497960 FAM237BA0A1B0GVD1 139 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 SLC9B1P1A6NJY1 282 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 C2orf74A8MZ97 194 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 BHMG1C9JSJ3 638 aaPredicted RBP14.87□□□□□ -0.03
NUP50-219ENST00000497960 BTN3A3O00478 584 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 BTN3A1O00481 513 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 PFDN6O15212 129 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 TP73O15350 636 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 VAPBO95292 243 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 APOA4P06727 396 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 PGAM1P18669 254 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 CCR7P32248 378 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 SHMT2P34897 504 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 STAT5AP42229 794 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 CSE1LP55060 971 aaKnown RBP14.87□□□□□ -0.03
NUP50-219ENST00000497960 TUBB4BP68371 445 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 MC1RQ01726 317 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 HSPA14Q0VDF9 509 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 PDIA2Q13087 525 aaKnown RBP14.87□□□□□ -0.03
NUP50-219ENST00000497960 TMED2Q15363 201 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 TRADDQ15628 312 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 MSS51Q4VC12 460 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 MRNIPQ6NTE8 343 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 FBXO38Q6PIJ6 1188 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 SDCCAG8Q86SQ7 713 aaPredicted RBP14.87□□□□□ -0.03
NUP50-219ENST00000497960 CCDC25Q86WR0 208 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 LRRC6Q86X45 466 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 OR5AR1Q8NGP9 310 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 OR8K5Q8NH50 307 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 ASZ1Q8WWH4 475 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 IFT81Q8WYA0 676 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 SEC14L1Q92503 715 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 LRRC39Q96DD0 335 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 RNF31Q96EP0 1072 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 MFSD3Q96ES6 412 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 MED8Q96G25 268 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 CFAP36Q96G28 342 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 SIGLEC10Q96LC7 697 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 PANX3Q96QZ0 392 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 XKR8Q9H6D3 395 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 FANCEQ9HB96 536 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 MARCH4Q9P2E8 410 aaPredicted RBP14.87□□□□□ -0.03
NUP50-219ENST00000497960 MTRF1LQ9UGC7 380 aaKnown RBP14.87□□□□□ -0.03
NUP50-219ENST00000497960 GNPTGQ9UJJ9 305 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 PADI1Q9ULC6 663 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 BTRCQ9Y297 605 aa14.87□□□□□ -0.03
NUP50-219ENST00000497960 TDRKHQ9Y2W6 561 aaKnown RBP14.87□□□□□ -0.03
NUP50-219ENST00000497960 MAGEB16A2A368 324 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 USP1O94782 785 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 PRDX3P30048 256 aaKnown RBP14.86□□□□□ -0.03
NUP50-219ENST00000497960 ELK3P41970 407 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 TBR1Q16650 682 aa14.86□□□□□ -0.03
NUP50-219ENST00000497960 HP1BP3Q5SSJ5 553 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms