RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 UNC13CQ8NB66 2214 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 MN1Q10571 1320 aaPredicted RBP18.86■□□□□ 0.61
HDAC4-212ENST00000495497 BTN3A1O00481 513 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 C9P02748 559 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 MPOP05164 745 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 MPC1LP0DKB6 136 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 HGFP14210 728 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 CD9P21926 228 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 SKIV2L2P42285 1042 aaKnown RBP18.86■□□□□ 0.61
HDAC4-212ENST00000495497 TAS2R39P59534 338 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 GRTP1Q5TC63 336 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 OOSP2Q86WS3 158 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 CEP97Q8IW35 865 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 DCUN1D3Q8IWE4 304 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 C2orf73Q8N5S3 287 aaPredicted RBP18.86■□□□□ 0.61
HDAC4-212ENST00000495497 LINGO1Q96FE5 620 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 CYTH2Q99418 400 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 STRADBQ9C0K7 418 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 PDP2Q9P2J9 529 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 SLC39A10Q9ULF5 831 aa18.86■□□□□ 0.61
HDAC4-212ENST00000495497 ARHGEF33A8MVX0 844 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 TMX2-CTNND1H3BSU7 103 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 RPN2P04844 631 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 CBSLP0DN79 551 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 ENO3P13929 434 aaPredicted RBP18.85■□□□□ 0.61
HDAC4-212ENST00000495497 CBSP35520 551 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 PMS2P54278 862 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 UAP1Q16222 522 aaPredicted RBP18.85■□□□□ 0.61
HDAC4-212ENST00000495497 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.85■□□□□ 0.61
HDAC4-212ENST00000495497 ARMC6Q6NXE6 501 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 KLHL35Q6PF15 583 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 FBXO38Q6PIJ6 1188 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 NEK10Q6ZWH5 1172 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 ADGRF3Q8IZF5 1079 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 GATA6Q92908 595 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 LIN37Q96GY3 246 aaPredicted RBP18.85■□□□□ 0.61
HDAC4-212ENST00000495497 PPM1MQ96MI6 270 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 MENTQ9BUN1 341 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 FUT8Q9BYC5 575 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 TXLNGYQ9BZA5 131 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 ACSS3Q9H6R3 686 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 EPHA6Q9UF33 1036 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 ADAMTS6Q9UKP5 1117 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 LOXL2Q9Y4K0 774 aa18.85■□□□□ 0.61
HDAC4-212ENST00000495497 CCDC187A0A096LP49 1063 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 GSAPA4D1B5 854 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 C1QTNF9BB2RNN3 333 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 PSIP1O75475 530 aaKnown RBP18.84■□□□□ 0.61
HDAC4-212ENST00000495497 TSPAN12O95859 305 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 C1QTNF9P0C862 333 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 TNFRSF8P28908 595 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 PKLRP30613 574 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 SPRP35270 261 aaPredicted RBP18.84■□□□□ 0.61
HDAC4-212ENST00000495497 SEPHS1P49903 392 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 KPNA2P52292 529 aaKnown RBP18.84■□□□□ 0.61
HDAC4-212ENST00000495497 VSNL1P62760 191 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 GABREP78334 506 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 FOXK2Q01167 660 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 NAB1Q13506 487 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 TRA2AQ13595 282 aaKnown RBP eCLIP18.84■□□□□ 0.61
HDAC4-212ENST00000495497 ERCC6LQ2NKX8 1250 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 CACHD1Q5VU97 1274 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 TTC23LQ6PF05 361 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 RAB11FIP2Q7L804 512 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 ARHGAP22Q7Z5H3 698 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 WDR36Q8NI36 951 aaKnown RBP18.84■□□□□ 0.61
HDAC4-212ENST00000495497 ASB11Q8WXH4 323 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 RAD51AP1Q96B01 352 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 GRAMD1AQ96CP6 724 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 ZDHHC12Q96GR4 267 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 PRR11Q96HE9 360 aaPredicted RBP18.84■□□□□ 0.61
HDAC4-212ENST00000495497 GPR22Q99680 433 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 MAP3K3Q99759 626 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 TMEM121BQ9BXQ6 578 aaPredicted RBP18.84■□□□□ 0.61
HDAC4-212ENST00000495497 RAB33BQ9H082 229 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 SPHK1Q9NYA1 384 aa18.84■□□□□ 0.61
HDAC4-212ENST00000495497 EIF3FO00303 357 aaPredicted RBP18.83■□□□□ 0.6
HDAC4-212ENST00000495497 RASGRF2O14827 1237 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 PHGDHO43175 533 aaKnown RBP18.83■□□□□ 0.6
HDAC4-212ENST00000495497 RIPK2O43353 540 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 RASSF9O75901 435 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 CHRM5P08912 532 aaPredicted RBP18.83■□□□□ 0.6
HDAC4-212ENST00000495497 CCL4P13236 92 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 ITIH1P19827 911 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 SHMT2P34897 504 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 CCNFP41002 786 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 RGS4P49798 205 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 IL2P60568 153 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 POU4F1Q01851 419 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 PRKAA1Q13131 559 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 BMPR2Q13873 1038 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 USP10Q14694 798 aaKnown RBP18.83■□□□□ 0.6
HDAC4-212ENST00000495497 UBE2R2Q712K3 238 aaPredicted RBP18.83■□□□□ 0.6
HDAC4-212ENST00000495497 TRMT10CQ7L0Y3 403 aaKnown RBP18.83■□□□□ 0.6
HDAC4-212ENST00000495497 TAX1BP1Q86VP1 789 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 MYO1HQ8N1T3 1032 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 FBXO39Q8N4B4 442 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 EIF1ADQ8N9N8 165 aaKnown RBP18.83■□□□□ 0.6
HDAC4-212ENST00000495497 ANKRD49Q8WVL7 239 aa18.83■□□□□ 0.6
HDAC4-212ENST00000495497 DLG3Q92796 817 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms