RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 NMBRP28336 390 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 PTPN4P29074 926 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 CCR7P32248 378 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 PRAMEP78395 509 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 BASP1P80723 227 aaKnown RBP9.29□□□□□ -0.92
MSH5-218ENST00000494646 GSTM4Q03013 218 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 TLE1Q04724 770 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 HSPA14Q0VDF9 509 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 CHAF1BQ13112 559 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 LAMB3Q13751 1172 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 TRIP13Q15645 432 aaPredicted RBP9.29□□□□□ -0.92
MSH5-218ENST00000494646 IGFBP7Q16270 282 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 CRTC2Q53ET0 693 aaPredicted RBP9.29□□□□□ -0.92
MSH5-218ENST00000494646 PCID2Q5JVF3 399 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 AFTPHQ6ULP2 937 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 CDHR3Q6ZTQ4 885 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 HOOK3Q86VS8 718 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 VRK3Q8IV63 474 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 LRRC8AQ8IWT6 810 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 KRT222Q8N1A0 295 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 PPHLN1Q8NEY8 458 aaKnown RBP9.29□□□□□ -0.92
MSH5-218ENST00000494646 LKAAEAR1Q8TD35 194 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 GPR87Q9BY21 358 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 SPRTNQ9H040 489 aaPredicted RBP9.29□□□□□ -0.92
MSH5-218ENST00000494646 ACTR5Q9H9F9 607 aaPredicted RBP9.29□□□□□ -0.92
MSH5-218ENST00000494646 FANCEQ9HB96 536 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 FAM60AQ9NP50 221 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 TUBD1Q9UJT1 453 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 TLK1Q9UKI8 766 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 TP53TG5Q9Y2B4 290 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 MAN2B2Q9Y2E5 1009 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 PCDHGA6Q9Y5G7 932 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 NBASA2RRP1 2371 aa9.29□□□□□ -0.92
MSH5-218ENST00000494646 UBR5O95071 2799 aaPredicted RBP9.28□□□□□ -0.92
MSH5-218ENST00000494646 TCRBV7S3A2A0A539 114 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 ARGFXA6NJG6 315 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 C21orf140B9A014 251 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 MATN2O00339 956 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 QSOX1O00391 747 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 CD3EAPO15446 510 aaKnown RBP9.28□□□□□ -0.92
MSH5-218ENST00000494646 ZNF749O43361 778 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 CTSBP07858 339 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 CHRM5P08912 532 aaPredicted RBP9.28□□□□□ -0.92
MSH5-218ENST00000494646 CCDC175P0C221 793 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 UGT2B7P16662 529 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 CYP2A7P20853 494 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 NPY2RP49146 381 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 CSRP3P50461 194 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 CCL11P51671 97 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 ACVR1Q04771 509 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 IL10RAQ13651 578 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 ZIC1Q15915 447 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 DEFB110Q30KQ9 67 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 PTCHD3Q3KNS1 767 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 LACTB2Q53H82 288 aaPredicted RBP9.28□□□□□ -0.92
MSH5-218ENST00000494646 SPESP1Q6UW49 350 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 PACS1Q6VY07 963 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 NLRP9Q7RTR0 991 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 TBC1D21Q8IYX1 336 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 DSELQ8IZU8 1212 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 CARFQ8N187 725 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 ENDOVQ8N8Q3 282 aaKnown RBP9.28□□□□□ -0.92
MSH5-218ENST00000494646 OR8K5Q8NH50 307 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 OR5K2Q8NHB8 316 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 CPT1BQ92523 772 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 N4BP2L2Q92802 583 aaPredicted RBP9.28□□□□□ -0.92
MSH5-218ENST00000494646 OR2A14Q96R47 310 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 CARD6Q9BX69 1037 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 AP1M1Q9BXS5 423 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 TRIM55Q9BYV6 548 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 PITPNM3Q9BZ71 974 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 EPN3Q9H201 632 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 CATSPERZQ9NTU4 200 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 PCMTD2Q9NV79 361 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 MARCH4Q9P2E8 410 aaPredicted RBP9.28□□□□□ -0.92
MSH5-218ENST00000494646 POLG2Q9UHN1 485 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 RIMKLBQ9ULI2 386 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 TTC7AQ9ULT0 858 aaPredicted RBP9.28□□□□□ -0.92
MSH5-218ENST00000494646 KLHL20Q9Y2M5 609 aa9.28□□□□□ -0.92
MSH5-218ENST00000494646 MDC1Q14676 2089 aaKnown RBP9.27□□□□□ -0.93
MSH5-218ENST00000494646 GOLGA8KD6RF30 607 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 E7EQ34 232 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 MKRN2OSH3BPM6 223 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 GOLGA8TH3BQL2 631 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 NDUFS3O75489 264 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 CBSLP0DN79 551 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 MGAT1P26572 445 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 PEBP1P30086 187 aaKnown RBP9.27□□□□□ -0.93
MSH5-218ENST00000494646 SHMT2P34897 504 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 RORAP35398 523 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 CBSP35520 551 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 PPARGP37231 505 aaPredicted RBP9.27□□□□□ -0.93
MSH5-218ENST00000494646 VPS41P49754 854 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 ITGA1P56199 1179 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 CCZ1BP86790 482 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 CCZ1P86791 482 aaPredicted RBP9.27□□□□□ -0.93
MSH5-218ENST00000494646 UGT8Q16880 541 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 ZNF789Q5FWF6 425 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 C1orf189Q5VU69 101 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 MLIPQ5VWP3 458 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms