RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 MLNP12872 115 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 ST6GAL1P15907 406 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 CYP2A7P20853 494 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 RPS3P23396 243 aaKnown RBP eCLIP16.9■□□□□ 0.36e-10■■■■□ 22.9
SEC13-218ENST00000490283 MAGEA6P43360 314 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 EIF3BP55884 814 aaKnown RBP16.9■□□□□ 0.3
SEC13-218ENST00000490283 NFATC3Q12968 1075 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 CYP1B1Q16678 543 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 KIAA0930Q6ICG6 404 aaPredicted RBP16.9■□□□□ 0.3
SEC13-218ENST00000490283 CES3Q6UWW8 571 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 UNC5DQ6UXZ4 953 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 UNC5AQ6ZN44 842 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 OTOAQ7RTW8 1153 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 DCUN1D3Q8IWE4 304 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 REXO1L1PQ8IX06 675 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 KRT222Q8N1A0 295 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 CFAP61Q8NHU2 1237 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 ACTRT1Q8TDG2 376 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 SEC14L1Q92503 715 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 MFSD3Q96ES6 412 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 TCF12Q99081 682 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 GEMIN8Q9NWZ8 242 aaKnown RBP16.9■□□□□ 0.3
SEC13-218ENST00000490283 TRMT1Q9NXH9 659 aaKnown RBP16.9■□□□□ 0.3
SEC13-218ENST00000490283 VPS9D1Q9Y2B5 631 aa16.9■□□□□ 0.3
SEC13-218ENST00000490283 MRPS18BQ9Y676 258 aaKnown RBP16.9■□□□□ 0.3
SEC13-218ENST00000490283 MAGEB16A2A368 324 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 CES2O00748 559 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 GPC4O75487 556 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 CHRM5P08912 532 aaPredicted RBP16.89■□□□□ 0.29
SEC13-218ENST00000490283 MSL3P1P0C860 447 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 UGT2B7P16662 529 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 AOAHP28039 575 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 FNTAP49354 379 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 POLE2P56282 527 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 RPS15P62841 145 aaKnown RBP16.89■□□□□ 0.29
SEC13-218ENST00000490283 ABRQ12979 859 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 KIR2DS3Q14952 304 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 PPP1R7Q15435 360 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 DEFB109BQ30KR1 87 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 GPR135Q8IZ08 494 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 RAB42Q8N4Z0 105 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 C19orf47Q8N9M1 422 aaKnown RBP16.89■□□□□ 0.29
SEC13-218ENST00000490283 LKAAEAR1Q8TD35 194 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 CT55Q8WUE5 264 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 APOBEC4Q8WW27 367 aaKnown RBP16.89■□□□□ 0.29
SEC13-218ENST00000490283 MR1Q95460 341 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 CLIP3Q96DZ5 547 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 FOPNLQ96NB1 174 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 TRAPPC9Q96Q05 1148 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 GPR87Q9BY21 358 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 KLHL25Q9H0H3 589 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 P2RY12Q9H244 342 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 PLAGL1Q9UM63 463 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 SNX12Q9UMY4 172 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 PCDHGA6Q9Y5G7 932 aa16.89■□□□□ 0.29
SEC13-218ENST00000490283 SMG1Q96Q15 3661 aaKnown RBP16.89■□□□□ 0.29
SEC13-218ENST00000490283 A0A0J9YY10 115 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 SDR42E2A6NKP2 422 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 ISM1B1AKI9 464 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 AVILO75366 819 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 PVRP15151 417 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 OGNP20774 298 aaKnown RBP16.88■□□□□ 0.29
SEC13-218ENST00000490283 F8A1P23610 371 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 OAS2P29728 719 aaKnown RBP16.88■□□□□ 0.29
SEC13-218ENST00000490283 RAB28P51157 221 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 ITGA1P56199 1179 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 KCNAB2Q13303 367 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 THOC5Q13769 683 aaKnown RBP16.88■□□□□ 0.29
SEC13-218ENST00000490283 ERV3-1Q14264 604 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 MCUQ8NE86 351 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 COG1Q8WTW3 980 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 SLC22A18Q96BI1 424 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 TCTN2Q96GX1 697 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 NRTNQ99748 197 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 RAB11FIP5Q9BXF6 653 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 TWSG1Q9GZX9 223 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 SLC25A18Q9H1K4 315 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 ACTR5Q9H9F9 607 aaPredicted RBP16.88■□□□□ 0.29
SEC13-218ENST00000490283 TUBD1Q9UJT1 453 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 SLC39A10Q9ULF5 831 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 POLHQ9Y253 713 aa16.88■□□□□ 0.29
SEC13-218ENST00000490283 FASNP49327 2511 aaKnown RBP16.87■□□□□ 0.29
SEC13-218ENST00000490283 GOLGA8KD6RF30 607 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 E7EQ34 232 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 GOLGA8TH3BQL2 631 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 GOLGA8MH3BSY2 632 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 CREG1O75629 220 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 TMEM63AO94886 807 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 SLCO2B1O94956 709 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 ESR1P03372 595 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 HBQ1P09105 142 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 TCP1P17987 556 aaKnown RBP16.87■□□□□ 0.29
SEC13-218ENST00000490283 ARNTP27540 789 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 PKLRP30613 574 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 FMO4P31512 558 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 DHX34Q14147 1143 aaKnown RBP16.87■□□□□ 0.29
SEC13-218ENST00000490283 KCTD19Q17RG1 926 aaPredicted RBP16.87■□□□□ 0.29
SEC13-218ENST00000490283 SLC5A12Q1EHB4 618 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 TYSND1Q2T9J0 566 aa16.87■□□□□ 0.29
SEC13-218ENST00000490283 PLEKHS1Q5SXH7 462 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms