RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 RFC1P35251 1148 aaPredicted RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 IDUAP35475 653 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 GP5P40197 560 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 HADHAP40939 763 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 LSSP48449 732 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 EIF2B2P49770 351 aaKnown RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 MEOX1P50221 254 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 LIMK2P53671 638 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CSE1LP55060 971 aaKnown RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 MLLT10P55197 1068 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CDH15P55291 814 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 PSME3P61289 254 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 YWHAEP62258 255 aaKnown RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 DYNLT1P63172 113 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CCNA1P78396 465 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 MPP1Q00013 466 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 MBTD1Q05BQ5 628 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CDC20Q12834 499 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 PRKAA1Q13131 559 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 PEX6Q13608 980 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 GBX1Q14549 363 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ZNF846Q147U1 533 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 GRM7Q14831 915 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 RAB39AQ14964 217 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 NR1D2Q14995 579 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CYTH1Q15438 398 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 MAPRE2Q15555 327 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ATP6AP1Q15904 470 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 PSMD5Q16401 504 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 FSCN1Q16658 493 aaKnown RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CYP2A13Q16696 494 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 LRRC26Q2I0M4 334 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 TRIM16LQ309B1 348 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 DUSP28Q4G0W2 176 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 GAGE13Q4V321 117 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 MTX3Q5HYI7 312 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 FGD3Q5JSP0 725 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ZNF484Q5JVG2 852 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 PPM1LQ5SGD2 360 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CCNYL2Q5T2Q4 361 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 GRTP1Q5TC63 336 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 VWA5B1Q5TIE3 1220 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 PRAMEF9Q5VWM5 478 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 SEL1L3Q68CR1 1132 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 LCN8Q6JVE9 175 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 EFCAB12Q6NXP0 572 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 XRRA1Q6P2D8 792 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 DENND1BQ6P3S1 775 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ZNF773Q6PK81 442 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 METTL7BQ6UX53 244 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 NAPRTQ6XQN6 538 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 TMEM26Q6ZUK4 368 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 UBE2R2Q712K3 238 aaPredicted RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 TFAP2DQ7Z6R9 452 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 IGFN1Q86VF2 1251 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 XYLT1Q86Y38 959 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 RFX6Q8HWS3 928 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 WDR49Q8IV35 697 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 BRSK2Q8IWQ3 736 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 AQP12AQ8IXF9 295 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CPNE9Q8IYJ1 553 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 HACE1Q8IYU2 909 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CADM3Q8N126 398 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 PARP8Q8N3A8 854 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 GALNT4Q8N4A0 578 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC15A4Q8N697 577 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 LILRA3Q8N6C8 439 aaPredicted RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ZNF781Q8N8C0 355 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 TDRD5Q8NAT2 981 aaKnown RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ANKRD52Q8NB46 1076 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 KDM1BQ8NB78 822 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 RNF149Q8NC42 400 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 LEMD2Q8NC56 503 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 PAPD5Q8NDF8 572 aaKnown RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 MCPH1Q8NEM0 835 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 PPHLN1Q8NEY8 458 aaKnown RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 OR5B17Q8NGF7 314 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 OR2T34Q8NGX1 318 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 OR2T3Q8NH03 318 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 JOSD2Q8TAC2 188 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 HMGCLL1Q8TB92 370 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 DEPDC1BQ8WUY9 529 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ARNTL2Q8WYA1 636 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CDKL2Q92772 493 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ZUFSPQ96AP4 578 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 C18orf25Q96B23 403 aaPredicted RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 TAMM41Q96BW9 452 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 TIFAQ96CG3 184 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 MCRS1Q96EZ8 462 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 VMP1Q96GC9 406 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 TXNDC15Q96J42 360 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 MAGED4Q96JG8 741 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 B3GALT6Q96L58 329 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 QKIQ96PU8 341 aaKnown RBP eCLIP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 RNF157Q96PX1 679 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CYP2S1Q96SQ9 504 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 YME1L1Q96TA2 773 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC29A1Q99808 456 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CPNE1Q99829 537 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 PAAF1Q9BRP4 392 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms