RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 MAGEH1Q9H213 219 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 TMEM245Q9H330 911 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 TMEM248Q9NWD8 314 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 TRIM10Q9UDY6 481 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 USP22Q9UPT9 525 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 MFHAS1Q9Y4C4 1052 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 STON1Q9Y6Q2 735 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 NOTCH2Q04721 2471 aa6.24□□□□□ -1.41
RTFDC1-209ENST00000487211 COL12A1Q99715 3063 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 ILVBLA1L0T0 632 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 TYW5A2RUC4 315 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 C3orf70A6NLC5 250 aaPredicted RBP6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 BTNL10A8MVZ5 291 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 K7ERQ8 282 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 ASNA1O43681 348 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 SNAP91O60641 907 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 SNX2O60749 519 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 ATG13O75143 517 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 ZMPSTE24O75844 475 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 LMNAP02545 664 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 DLDP09622 509 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 SP9P0CG40 484 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 HLA-EP13747 358 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 ERCC2P18074 760 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 POLR2EP19388 210 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 EPHA3P29320 983 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 MAN1A1P33908 653 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 SLC1A1P43005 524 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 HCAR3P49019 387 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 KRT83P78385 493 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 ECT2LQ008S8 904 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 GNA12Q03113 381 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 FOXE3Q13461 319 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 SLC12A1Q13621 1099 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 DPYSQ14117 519 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 DMC1Q14565 340 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 DPYSL2Q16555 572 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 PPP6R3Q5H9R7 873 aaPredicted RBP6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 RFX8Q6ZV50 586 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 GATAD2AQ86YP4 633 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 CCDC117Q8IWD4 279 aaPredicted RBP6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 LNX2Q8N448 690 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 ZNF366Q8N895 744 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 RTL3Q8N8U3 475 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 WFIKKN2Q8TEU8 576 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 TEKT4Q8WW24 435 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 NELL1Q92832 810 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 ARHGEF2Q92974 986 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 GRAMD1AQ96CP6 724 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 TBC1D31Q96DN5 1066 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 CSPG4P5Q96PW8 444 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 GABRG3Q99928 467 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 NCAPGQ9BPX3 1015 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 RETREG1Q9H6L5 497 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 GLOD4Q9HC38 313 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 PRMT8Q9NR22 394 aaPredicted RBP6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 ETNK2Q9NVF9 386 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 LUZP4Q9P127 313 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 MMP17Q9ULZ9 603 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 PLA2G4CQ9UP65 541 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 ERVW-1Q9UQF0 538 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 PCDHGB3Q9Y5G1 929 aa6.23□□□□□ -1.41
RTFDC1-209ENST00000487211 MACROD2A1Z1Q3 448 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 GRID2IPA4D2P6 1211 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 TTC34A8MYJ7 566 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 AGPSO00116 658 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 EEF2KO00418 725 aaKnown RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 SMAD6O43541 496 aaKnown RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 ZNF821O75541 412 aaPredicted RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 USP1O94782 785 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 PAPSS2O95340 614 aaPredicted RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 MOCS3O95396 460 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 ATP5BP06576 529 aaKnown RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 RHOCP08134 193 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 EGR2P11161 476 aaPredicted RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 TNNT1P13805 278 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 NPPBP16860 134 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 DESP17661 470 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 KDELR1P24390 212 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 PRKCHP24723 683 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 HOXA6P31267 233 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 SLC5A2P31639 672 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 GJC1P36383 396 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 STK19P49842 368 aaPredicted RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 CCR3P51677 355 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 CDH6P55285 790 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 NXPH1P58417 271 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 TPI1P60174 286 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 ARF5P84085 180 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 KIF5AQ12840 1032 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 DPYSL3Q14195 570 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 TBCCQ15814 346 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 HADHQ16836 314 aaKnown RBP6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 TMEM95Q3KNT9 176 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 EOGTQ5NDL2 527 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 C9orf64Q5T6V5 341 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 LRRC38Q5VT99 294 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 SLC9A4Q6AI14 798 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 VWA1Q6PCB0 445 aa6.22□□□□□ -1.41
RTFDC1-209ENST00000487211 LINGO4Q6UY18 593 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms