RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 RNPEPL1Q9HAU8 725 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 SDR39U1Q9NRG7 319 aaPredicted RBP16.3■□□□□ 0.2
CTSA-207ENST00000484855 AIG1Q9NVV5 245 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 KLQ9UEF7 1012 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 TMEM98Q9Y2Y6 226 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 POP7O75817 140 aaKnown RBP16.3■□□□□ 0.2
CTSA-207ENST00000484855 LMNAP02545 664 aaKnown RBP16.3■□□□□ 0.2
CTSA-207ENST00000484855 COL9A1P20849 921 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 DRD1P21728 446 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 DIO3P55073 304 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 GRSF1Q12849 480 aaKnown RBP eCLIP16.3■□□□□ 0.24e-6■■□□□ 12
CTSA-207ENST00000484855 NR6A1Q15406 480 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 C6orf136Q5SQH8 315 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 PGM2L1Q6PCE3 622 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 RIPOR1Q6ZS17 1223 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 FUNDC1Q8IVP5 155 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 SFRP1Q8N474 314 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 C1orf50Q9BV19 199 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 SLC6A17Q9H1V8 727 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 WDR41Q9HAD4 459 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 DNAJC11Q9NVH1 559 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 PRPF19Q9UMS4 504 aaKnown RBP16.3■□□□□ 0.2
CTSA-207ENST00000484855 ZFR2Q9UPR6 939 aaKnown RBP16.3■□□□□ 0.2
CTSA-207ENST00000484855 GPR45Q9Y5Y3 372 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 TMEM265A0A087WTH1 108 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 C17orf113A0A1B0GUU1 675 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 A0A1W2PQF6 199 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 ITPKAP23677 461 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 AGERQ15109 404 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 NEK5Q6P3R8 708 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 BNC2Q6ZN30 1099 aaPredicted RBP16.29■□□□□ 0.2
CTSA-207ENST00000484855 HOMEZQ8IX15 550 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 FBXW8Q8N3Y1 598 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 OR2L2Q8NH16 312 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 HM13Q8TCT9 377 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 ATL1Q8WXF7 558 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 STMN2Q93045 179 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 CCDC138Q96M89 665 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 KCNK12Q9HB15 430 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 SLC22A14Q9Y267 594 aa16.29■□□□□ 0.2
CTSA-207ENST00000484855 PRR23AA6NEV1 266 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 NR5A2O00482 541 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 FBP2O00757 339 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 LSM1O15116 133 aaKnown RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 PLRG1O43660 514 aaKnown RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 CCR3P51677 355 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 PLOD1Q02809 727 aaPredicted RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 IRF4Q15306 451 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 LRIT3Q3SXY7 679 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 RNF165Q6ZSG1 346 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 EFCAB3Q8N7B9 438 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 OR14C36Q8NHC7 312 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 MAGEC3Q8TD91 643 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 DNASE1L2Q92874 299 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 CCDC124Q96CT7 223 aaKnown RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 STOX2Q9P2F5 926 aaPredicted RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 LIMD1Q9UGP4 676 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 MYO10Q9HD67 2058 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 MGAT4DA6NG13 374 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 H0Y3Z8 333 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 MANBAO00462 879 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 MRASO14807 208 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 CFLARO15519 480 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 NRP2O60462 931 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 ULK1O75385 1050 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 MRPL19P49406 292 aaKnown RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 MTTPP55157 894 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 PFN3P60673 137 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 RPS21P63220 83 aaKnown RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 NFE2L1Q14494 772 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 CCSMST1Q4G0I0 132 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 GGTA1PQ4G0N0 100 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 SLC44A3Q8N4M1 653 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 KLK6Q92876 244 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 SERPINI1Q99574 410 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 LGR4Q9BXB1 951 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 BRINP2Q9C0B6 783 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 CD248Q9HCU0 757 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 MBNL1Q9NR56 388 aaKnown RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 FARSBQ9NSD9 589 aaKnown RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 NKX1-2Q9UD57 310 aaPredicted RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 CIDEBQ9UHD4 219 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 ZNF490Q9ULM2 529 aaPredicted RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 L3MBTL1Q9Y468 752 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 PRKAB1Q9Y478 270 aa16.28■□□□□ 0.2
CTSA-207ENST00000484855 PCYT1BQ9Y5K3 369 aaPredicted RBP16.28■□□□□ 0.2
CTSA-207ENST00000484855 BBIP1A8MTZ0 92 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 SLC28A1O00337 649 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 RGS14O43566 566 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 SORBS2O94875 1100 aaKnown RBP16.27■□□□□ 0.2
CTSA-207ENST00000484855 KRT6AP02538 564 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 KRT6BP04259 564 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 KRT6CP48668 564 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 ACTR3P61158 418 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 FGL2Q14314 439 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 CPSF6Q16630 551 aaKnown RBP eCLIP16.27■□□□□ 0.2
CTSA-207ENST00000484855 PDCD4Q53EL6 469 aaKnown RBP16.27■□□□□ 0.2
CTSA-207ENST00000484855 KIAA1161Q6NSJ0 714 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 AGTRAPQ6RW13 159 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 XKR5Q6UX68 686 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms