RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MUC13Q9H3R2 512 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 RPAP3Q9H6T3 665 aaPredicted RBP3.9□□□□□ -1.79
UBR3-209ENST00000477461 VAT1LQ9HCJ6 419 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 LTB4R2Q9NPC1 389 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 KLHL1Q9NR64 748 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 PCDHB16Q9NRJ7 776 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 SLC6A13Q9NSD5 602 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 MAD2L2Q9UI95 211 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 ERVK-11Q9UQG0 969 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 AAR2Q9Y312 384 aaKnown RBP3.9□□□□□ -1.79
UBR3-209ENST00000477461 CEPT1Q9Y6K0 416 aa3.9□□□□□ -1.79
UBR3-209ENST00000477461 LOC285556D6RIA3 1793 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 A0A1W2PQF6 199 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 GOLGA6L9A6NEM1 432 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 H3BQV1 296 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 ZBED4O75132 1171 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 FLOT1O75955 427 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 BAIAP3O94812 1187 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 PLEKHA8P1O95397 391 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 DEXIO95424 95 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 SCGB1D1O95968 90 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 LAMP2P13473 410 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 IFNAR1P17181 557 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 GJB2P29033 226 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 RGS2P41220 211 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 TMEM115Q12893 351 aaPredicted RBP3.89□□□□□ -1.79
UBR3-209ENST00000477461 CUL4AQ13619 759 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 COG2Q14746 738 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 DRAP1Q14919 205 aaPredicted RBP3.89□□□□□ -1.79
UBR3-209ENST00000477461 DEFB115Q30KQ5 88 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 DPCR1Q3MIW9 517 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 TAOK1Q7L7X3 1001 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 ANKRD23Q86SG2 305 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 NFE4Q86UQ8 179 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 KMT5CQ86Y97 462 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 KRTAP7-1Q8IUC3 87 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 CHERPQ8IWX8 916 aaKnown RBP3.89□□□□□ -1.79
UBR3-209ENST00000477461 ZNF713Q8N859 430 aaPredicted RBP3.89□□□□□ -1.79
UBR3-209ENST00000477461 TAS1R2Q8TE23 839 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 CCDC12Q8WUD4 166 aaPredicted RBP3.89□□□□□ -1.79
UBR3-209ENST00000477461 SGCDQ92629 289 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 C12orf42Q96LP6 360 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 TMEM68Q96MH6 324 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 PCYT2Q99447 389 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 SPZ1Q9BXG8 430 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 IFIH1Q9BYX4 1025 aaKnown RBP3.89□□□□□ -1.79
UBR3-209ENST00000477461 UBA5Q9GZZ9 404 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 MAF1Q9H063 256 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 KCNN2Q9H2S1 579 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 ZHX3Q9H4I2 956 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 PLEKHA5Q9HAU0 1116 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 SCPEP1Q9HB40 452 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 PCDH9Q9HC56 1237 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 OLA1Q9NTK5 396 aaKnown RBP3.89□□□□□ -1.79
UBR3-209ENST00000477461 HOXC10Q9NYD6 342 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 DLGAP2Q9P1A6 1054 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 ORC3Q9UBD5 711 aaPredicted RBP3.89□□□□□ -1.79
UBR3-209ENST00000477461 PNMA2Q9UL42 364 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 AGTPBP1Q9UPW5 1226 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 STK36Q9NRP7 1315 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 NID2Q14112 1375 aa3.89□□□□□ -1.79
UBR3-209ENST00000477461 IGKV3D-15A0A087WSY6 115 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 LILRA5A6NI73 299 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 EIF3CLB5ME19 914 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 IFNL4K9M1U5 179 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 ZBTB5O15062 677 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 JAK2O60674 1132 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 USO1O60763 962 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 SCG2P13521 617 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 MYOD1P15172 320 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 ZNF182P17025 639 aaPredicted RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 S1PR1P21453 382 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 ALDH4A1P30038 563 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 FASLGP48023 281 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 NR0B1P51843 470 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 NAPAP54920 295 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 SEC61BP60468 96 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 RPS3AP61247 264 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 PDE1BQ01064 536 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 CSTF3Q12996 717 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 DCTN2Q13561 401 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 TBCEQ15813 527 aaPredicted RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 CCDC6Q16204 474 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 CDC37Q16543 378 aaPredicted RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 USH1GQ495M9 461 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 SLC45A4Q5BKX6 768 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 CXorf66Q5JRM2 361 aaPredicted RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 GGNBP1Q5YKI7 109 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 HIST2H2BDQ6DRA6 164 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 ARHGAP11AQ6P4F7 1023 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 ZNF852Q6ZMS4 543 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 QSOX2Q6ZRP7 698 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 C1orf122Q6ZSJ8 110 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 RSRC2Q7L4I2 434 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 SPATA6LQ8N4H0 392 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 SRBD1Q8N5C6 995 aaKnown RBP3.88□□□□□ -1.79
UBR3-209ENST00000477461 TMEM116Q8NCL8 245 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 CCDC148Q8NFR7 591 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 SKA1Q96BD8 255 aa3.88□□□□□ -1.79
UBR3-209ENST00000477461 C8orf76Q96K31 380 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms