RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 LHX9Q9NQ69 397 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 TP53TG5Q9Y2B4 290 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.09□□□□□ -1.27
BRCA1-214ENST00000477152 A0A0U1RQS6 177 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 TLCD2A6NGC4 264 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 KDM1AO60341 852 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 DPM1O60762 260 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 KRT1P04264 644 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 MMP2P08253 660 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 HBQ1P09105 142 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 HLA-DPA1P20036 260 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 RPL10P27635 214 aaKnown RBP7.09□□□□□ -1.27
BRCA1-214ENST00000477152 PTPN4P29074 926 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 CD97P48960 835 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 RRADP55042 308 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 GFERP55789 205 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 SRSF1Q07955 248 aaKnown RBP eCLIP7.09□□□□□ -1.27
BRCA1-214ENST00000477152 DMPKQ09013 629 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 MPP3Q13368 585 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 GPR18Q14330 331 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 PRPSAP1Q14558 356 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 ATP13A4Q4VNC1 1196 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 E4F1Q66K89 784 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-214ENST00000477152 CAVIN1Q6NZI2 390 aaKnown RBP7.09□□□□□ -1.27
BRCA1-214ENST00000477152 FAM92BQ6ZTR7 304 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 HOOK3Q86VS8 718 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 TMEM126BQ8IUX1 230 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 PQLC3Q8N755 202 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 OR8K1Q8NGG5 319 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 KISS1RQ969F8 398 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-214ENST00000477152 DCUN1D1Q96GG9 259 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 ELMO2Q96JJ3 720 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 CCDC42Q96M95 316 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 MCMBPQ9BTE3 642 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 AARSD1Q9BTE6 412 aaKnown RBP7.09□□□□□ -1.27
BRCA1-214ENST00000477152 SLC25A23Q9BV35 468 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 FSD1LQ9BXM9 530 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 VPS37BQ9H9H4 285 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF624Q9P2J8 865 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-214ENST00000477152 TRHDEQ9UKU6 1024 aa7.09□□□□□ -1.27
BRCA1-214ENST00000477152 TENM4Q6N022 2769 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 GLYATL1P3A0A0U1RQE8 302 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 C2orf81A6NN90 581 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 HACD1B0YJ81 288 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 F8W8V4 182 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SPOPO43791 374 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 PMPCBO75439 489 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 ZBTB11O95625 1053 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SLC35G4P0C7Q5 338 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 BPIP17213 487 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 AKT1P31749 480 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 HNRNPH3P31942 346 aaKnown RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 CETN2P41208 172 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 TUBB4BP68371 445 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SEMA5AQ13591 1074 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 TUBB2AQ13885 445 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 IQCB1Q15051 598 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 UGT8Q16880 541 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 GTF2IRD2BQ6EKJ0 949 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 ITPRIPL1Q6GPH6 555 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 GLT6D1Q7Z4J2 308 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 GTF2IRD2Q86UP8 949 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 CPT1BQ92523 772 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 P3H4Q92791 437 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 MIB2Q96AX9 1013 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 ULK4Q96C45 1275 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 TEKT5Q96M29 485 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 CLUHP3Q96NS8 147 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 IP6K3Q96PC2 410 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 TRIB3Q96RU7 358 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 TUBB2BQ9BVA1 445 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 FGF21Q9NSA1 209 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 KCND1Q9NSA2 647 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SOHLH2Q9NX45 425 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 OGFRQ9NZT2 677 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 KLHL8Q9P2G9 620 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 FARSAQ9Y285 508 aaKnown RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 PADI2Q9Y2J8 665 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 PCDHGA9Q9Y5G4 932 aaKnown RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SLC30A1Q9Y6M5 507 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 CAPN6Q9Y6Q1 641 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 ATMQ13315 3056 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 TRAV20A0A0B4J274 112 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 STX7O15400 261 aaKnown RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SCRG1O75711 98 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 POP7O75817 140 aaKnown RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 ANXA9O76027 345 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 AGFG2O95081 481 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 RAB40ALP0C0E4 278 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 AGXTP21549 392 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 LEPRP48357 1165 aaKnown RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 DRG2P55039 364 aaKnown RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 GEMP55040 296 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 TAS2R40P59535 323 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 SLC10A2Q12908 348 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-214ENST00000477152 ZBTB17Q13105 803 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 CHRNA6Q15825 494 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 IGFBP7Q16270 282 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 TMEM220Q6QAJ8 160 aa7.08□□□□□ -1.28
BRCA1-214ENST00000477152 PID1Q7Z2X4 250 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms