RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PRMT5O14744 637 aaPredicted RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 CD3EAPO15446 510 aaKnown RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 CEP104O60308 925 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 CAPN1P07384 714 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 CHRM5P08912 532 aaPredicted RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 RAB40ALP0C0E4 278 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 PVRP15151 417 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 UGT2B7P16662 529 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 SHMT2P34897 504 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 SESN2P58004 480 aaPredicted RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 RPS18P62269 152 aaKnown RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 CCZ1BP86790 482 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 CCZ1P86791 482 aaPredicted RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 ABRQ12979 859 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 DNAJC21Q5F1R6 531 aaKnown RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 AARS2Q5JTZ9 985 aaKnown RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 LCN10Q6JVE6 187 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 TCTN3Q6NUS6 607 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 CDHR3Q6ZTQ4 885 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 GSTA5Q7RTV2 222 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 SYVN1Q86TM6 617 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 LDB1Q86U70 411 aaPredicted RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 VRK3Q8IV63 474 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 APLFQ8IW19 511 aaPredicted RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 SLC22A15Q8IZD6 547 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 DSELQ8IZU8 1212 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 ASZ1Q8WWH4 475 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 THAP4Q8WY91 577 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 TCTN2Q96GX1 697 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 KIFC1Q9BW19 673 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 TRIM4Q9C037 500 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 IL22Q9GZX6 179 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 CHRNA10Q9GZZ6 450 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 FAM60AQ9NP50 221 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 HOMER3Q9NSC5 361 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 TREX1Q9NSU2 369 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 CATSPERZQ9NTU4 200 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 BFARQ9NZS9 450 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 MARCH4Q9P2E8 410 aaPredicted RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 ANAPC2Q9UJX6 822 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 TLK1Q9UKI8 766 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 TDRKHQ9Y2W6 561 aaKnown RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 ZNF106Q9H2Y7 1883 aaKnown RBP10.44□□□□□ -0.74
SEC13-214ENST00000476597 COL12A1Q99715 3063 aa10.44□□□□□ -0.74
SEC13-214ENST00000476597 RELNP78509 3460 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 IQCF5A8MTL0 148 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 E7EQ34 232 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 H3BMH7 237 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 MKRN2OSH3BPM6 223 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 K7EM74 188 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 KDM1AO60341 852 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 RFPL1O75677 317 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 SLCO2B1O94956 709 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 CYP2A7P20853 494 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 AOAHP28039 575 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 NMBRP28336 390 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 CXCR5P32302 372 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 GABRA4P48169 554 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 TTPAP49638 278 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 PMS2P54278 862 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 CSE1LP55060 971 aaKnown RBP10.43□□□□□ -0.74
SEC13-214ENST00000476597 ITGA1P56199 1179 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 CRADDP78560 199 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 BASP1P80723 227 aaKnown RBP10.43□□□□□ -0.74
SEC13-214ENST00000476597 CDK16Q00536 496 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 TLE1Q04724 770 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 HSPA14Q0VDF9 509 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 ZIC1Q15915 447 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 KYNUQ16719 465 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 SYTL3Q4VX76 610 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 LACTB2Q53H82 288 aaPredicted RBP10.43□□□□□ -0.74
SEC13-214ENST00000476597 LRRC8BQ6P9F7 803 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 TRIM73Q86UV7 250 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 HOOK3Q86VS8 718 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 PRELID2Q8N945 189 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 C19orf47Q8N9M1 422 aaKnown RBP10.43□□□□□ -0.74
SEC13-214ENST00000476597 LKAAEAR1Q8TD35 194 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 CLIP3Q96DZ5 547 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 MENTQ9BUN1 341 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 TSSK1BQ9BXA7 367 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 NLNQ9BYT8 704 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 P2RY12Q9H244 342 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 ACTR5Q9H9F9 607 aaPredicted RBP10.43□□□□□ -0.74
SEC13-214ENST00000476597 MRM3Q9HC36 420 aaKnown RBP10.43□□□□□ -0.74
SEC13-214ENST00000476597 MAN2B2Q9Y2E5 1009 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 PPP2R2CQ9Y2T4 447 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 LRRK2Q5S007 2527 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 NBASA2RRP1 2371 aa10.43□□□□□ -0.74
SEC13-214ENST00000476597 A0A0J9YY10 115 aa10.42□□□□□ -0.74
SEC13-214ENST00000476597 TCRBV7S3A2A0A539 114 aa10.42□□□□□ -0.74
SEC13-214ENST00000476597 ISM1B1AKI9 464 aa10.42□□□□□ -0.74
SEC13-214ENST00000476597 ZNF749O43361 778 aa10.42□□□□□ -0.74
SEC13-214ENST00000476597 HCRTR1O43613 425 aa10.42□□□□□ -0.74
SEC13-214ENST00000476597 NDUFS3O75489 264 aa10.42□□□□□ -0.74
SEC13-214ENST00000476597 APOA4P06727 396 aa10.42□□□□□ -0.74
SEC13-214ENST00000476597 HBQ1P09105 142 aa10.42□□□□□ -0.74
SEC13-214ENST00000476597 TPSB2P20231 275 aa10.42□□□□□ -0.74
SEC13-214ENST00000476597 RPS3P23396 243 aaKnown RBP eCLIP10.42□□□□□ -0.746e-10■■■■□ 20.2
SEC13-214ENST00000476597 PEBP1P30086 187 aaKnown RBP10.42□□□□□ -0.74
SEC13-214ENST00000476597 CASRP41180 1078 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms