RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 PRSS57Q6UWY2 283 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 UNQ6126/PRO20091Q6UXV3 157 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 TUBA1AQ71U36 451 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 BMPERQ8N8U9 685 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 KCNH5Q8NCM2 988 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 GRAPLQ8TC17 118 aaPredicted RBP5.59□□□□□ -1.51
VPS50-212ENST00000476413 MED30Q96HR3 178 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 SPATA33Q96N06 139 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 IL17FQ96PD4 163 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 TUBA1CQ9BQE3 449 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 FERMT1Q9BQL6 677 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 POLR3CQ9BUI4 534 aaPredicted RBP5.59□□□□□ -1.51
VPS50-212ENST00000476413 DNAJC4Q9NNZ3 241 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 ARGLU1Q9NWB6 273 aaPredicted RBP5.59□□□□□ -1.51
VPS50-212ENST00000476413 KCNK7Q9Y2U2 307 aa5.59□□□□□ -1.51
VPS50-212ENST00000476413 LACTBL1A8MY62 500 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 PRAC2D3DTV9 90 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 E9PI62 339 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 CTSVO60911 334 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 SUPT20HL2P0C7V6 817 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 GMPSP49915 693 aaPredicted RBP5.58□□□□□ -1.52
VPS50-212ENST00000476413 FOXG1P55316 489 aaPredicted RBP5.58□□□□□ -1.52
VPS50-212ENST00000476413 ZXDBP98169 803 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 ITGA7Q13683 1181 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 KEAP1Q14145 624 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 LBHQ53QV2 105 aaPredicted RBP5.58□□□□□ -1.52
VPS50-212ENST00000476413 GPALPP1Q8IXQ4 340 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 NPEPL1Q8NDH3 523 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 C9orf43Q8TAL5 461 aaPredicted RBP5.58□□□□□ -1.52
VPS50-212ENST00000476413 GDAP1Q8TB36 358 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 LYZL4Q96KX0 146 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 SGK494Q96LW2 274 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 STK26Q9P289 416 aa5.58□□□□□ -1.52
VPS50-212ENST00000476413 HEG1Q9ULI3 1381 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 A0A1W2PPI3 338 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 A4D1N5 150 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 H0YAE9 185 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 DNM1LO00429 736 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 GAPDHSO14556 408 aaPredicted RBP5.57□□□□□ -1.52
VPS50-212ENST00000476413 SYNGR3O43761 229 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 SLC28A2O43868 658 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 IGHV4-39P01824 125 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 HSP90AB1P08238 724 aaKnown RBP5.57□□□□□ -1.52
VPS50-212ENST00000476413 HAPLN1P10915 354 aaPredicted RBP5.57□□□□□ -1.52
VPS50-212ENST00000476413 GNAZP19086 355 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 NR1D1P20393 614 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 CASTP20810 708 aaKnown RBP5.57□□□□□ -1.52
VPS50-212ENST00000476413 PSMA3P25788 255 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 SLC6A6P31641 620 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 ZNF132P52740 706 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 CLDN15P56746 228 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 PTENP60484 403 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 SCN1BQ07699 218 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 PTK6Q13882 451 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 KIR2DS3Q14952 304 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 CA9Q16790 459 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 TCTE1Q5JU00 501 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 SIRPB2Q5JXA9 342 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 SPDYCQ5MJ68 293 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 SLC10A5Q5PT55 438 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 NADSYN1Q6IA69 706 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 C11orf88Q6PI97 169 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 C11orf57Q6ZUT1 292 aaPredicted RBP5.57□□□□□ -1.52
VPS50-212ENST00000476413 PIWIL3Q7Z3Z3 882 aaKnown RBP5.57□□□□□ -1.52
VPS50-212ENST00000476413 ARHGAP22Q7Z5H3 698 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 SLC9B2Q86UD5 537 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 DCP1BQ8IZD4 617 aaKnown RBP5.57□□□□□ -1.52
VPS50-212ENST00000476413 SIX6OS1Q8N1H7 587 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 ZNF611Q8N823 705 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 KBTBD3Q8NAB2 608 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 SPATA20Q8TB22 786 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 NUDCD2Q8WVJ2 157 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 CCDC114Q96M63 670 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 RAD9AQ99638 391 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 MLPHQ9BV36 600 aaPredicted RBP5.57□□□□□ -1.52
VPS50-212ENST00000476413 C1QTNF4Q9BXJ3 329 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 RSPH9Q9H1X1 276 aaPredicted RBP5.57□□□□□ -1.52
VPS50-212ENST00000476413 FKRPQ9H9S5 495 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 CDH20Q9HBT6 801 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 APOBEC3GQ9HC16 384 aaKnown RBP5.57□□□□□ -1.52
VPS50-212ENST00000476413 TBC1D7Q9P0N9 293 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 POU2F3Q9UKI9 436 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 SNX7Q9UNH6 387 aa5.57□□□□□ -1.52
VPS50-212ENST00000476413 C5orf52A6NGY3 159 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 INSIG1O15503 277 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 EPCAMP16422 314 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 ACAT1P24752 427 aaKnown RBP5.56□□□□□ -1.52
VPS50-212ENST00000476413 TIA1P31483 386 aaKnown RBP eCLIP5.56□□□□□ -1.52
VPS50-212ENST00000476413 TCF7P36402 384 aaPredicted RBP5.56□□□□□ -1.52
VPS50-212ENST00000476413 CX3CL1P78423 397 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 DMPKQ09013 629 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 ZNF415Q09FC8 603 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 CUL3Q13618 768 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 MEP1BQ16820 701 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 TYSND1Q2T9J0 566 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 PHLDA2Q53GA4 152 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 IRAK1BP1Q5VVH5 260 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 CAPRIN2Q6IMN6 1127 aaKnown RBP5.56□□□□□ -1.52
VPS50-212ENST00000476413 MOXD1Q6UVY6 613 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 OTOAQ7RTW8 1153 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms