RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 CPSF6Q16630 551 aaKnown RBP eCLIP17.55■□□□□ 0.4
VARS2-206ENST00000473916 CDKL4Q5MAI5 379 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 C1orf146Q5VVC0 180 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 RETREG3Q86VR2 466 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 MIER2Q8N344 545 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 RNF148Q8N7C7 305 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 SPDYE1Q8NFV5 336 aaPredicted RBP17.55■□□□□ 0.4
VARS2-206ENST00000473916 NUDT8Q8WV74 236 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 MTFMTQ96DP5 389 aaKnown RBP17.55■□□□□ 0.4
VARS2-206ENST00000473916 WDR41Q9HAD4 459 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 EFCAB1Q9HAE3 211 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 RNPEPL1Q9HAU8 725 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 SDR39U1Q9NRG7 319 aaPredicted RBP17.55■□□□□ 0.4
VARS2-206ENST00000473916 AIG1Q9NVV5 245 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 CCL27Q9Y4X3 112 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 H3BM21 787 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 LSM1O15116 133 aaKnown RBP17.55■□□□□ 0.4
VARS2-206ENST00000473916 NPC1O15118 1278 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 NARSO43776 548 aaKnown RBP17.55■□□□□ 0.4
VARS2-206ENST00000473916 VPS4BO75351 444 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 POP7O75817 140 aaKnown RBP17.55■□□□□ 0.4
VARS2-206ENST00000473916 CAPN3P20807 821 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 MSX2P35548 267 aaPredicted RBP17.55■□□□□ 0.4
VARS2-206ENST00000473916 HMGCS1Q01581 520 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 ART3Q13508 389 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 INPP5AQ14642 412 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 IRF4Q15306 451 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 LAYNQ6UX15 382 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 ADAMTSL4Q6UY14 1074 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 LRRC70Q7Z2Q7 622 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 NET1Q7Z628 596 aaPredicted RBP17.55■□□□□ 0.4
VARS2-206ENST00000473916 SLC44A3Q8N4M1 653 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 FNDC5Q8NAU1 212 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 OR14C36Q8NHC7 312 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 CDRT15Q96T59 188 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 PKP4Q99569 1192 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 ACTR8Q9H981 624 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 SLC23A2Q9UGH3 650 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 DNAH14Q0VDD8 3507 aa17.55■□□□□ 0.4
VARS2-206ENST00000473916 PABPN1LA6NDY0 278 aaKnown RBP17.54■□□□□ 0.4
VARS2-206ENST00000473916 CIB2O75838 187 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 EBLN1P0CF75 366 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 MAP4P27816 1152 aaKnown RBP17.54■□□□□ 0.4
VARS2-206ENST00000473916 ZFP36L2P47974 494 aaKnown RBP17.54■□□□□ 0.4
VARS2-206ENST00000473916 AP1S2P56377 157 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 GTF2H3Q13889 308 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 NR6A1Q15406 480 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 VPS26BQ4G0F5 336 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 ATP6AP1LQ52LC2 224 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 FBXW8Q8N3Y1 598 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 FBXL8Q96CD0 374 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 LRCH3Q96II8 777 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 SLC39A3Q9BRY0 314 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 INTS7Q9NVH2 962 aaKnown RBP17.54■□□□□ 0.4
VARS2-206ENST00000473916 STOX2Q9P2F5 926 aaPredicted RBP17.54■□□□□ 0.4
VARS2-206ENST00000473916 TRPS1Q9UHF7 1281 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 MANBAO00462 879 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 SLC16A8O95907 504 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 CD72P21854 359 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 CCND1P24385 295 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 MAT2AP31153 395 aaKnown RBP17.54■□□□□ 0.4
VARS2-206ENST00000473916 HNMTP50135 292 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 THOP1P52888 689 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 MTTPP55157 894 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 UFM1P61960 85 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 ERVK-8P63133 956 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 LRP8Q14114 963 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 STARD3Q14849 445 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 CCDC85BQ15834 202 aaPredicted RBP17.54■□□□□ 0.4
VARS2-206ENST00000473916 MMEL1Q495T6 779 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 RFTN2Q52LD8 501 aaPredicted RBP17.54■□□□□ 0.4
VARS2-206ENST00000473916 METTL2BQ6P1Q9 378 aaKnown RBP17.54■□□□□ 0.4
VARS2-206ENST00000473916 C16orf89Q6UX73 402 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 TCAIMQ8N3R3 496 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 MRPL1Q9BYD6 325 aaKnown RBP17.54■□□□□ 0.4
VARS2-206ENST00000473916 FZD3Q9NPG1 666 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 RIC8BQ9NVN3 520 aa17.54■□□□□ 0.4
VARS2-206ENST00000473916 ZNF490Q9ULM2 529 aaPredicted RBP17.54■□□□□ 0.4
VARS2-206ENST00000473916 KCNE1BA0A087WTH5 132 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 SHISA7A6NL88 538 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 MRASO14807 208 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 CLDN9O95484 217 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 IDO1P14902 403 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 ACADVLP49748 655 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 NEK2P51955 445 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 ACTR3P61158 418 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 CEACAM7Q14002 265 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 RCN1Q15293 331 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 RPS6KA2Q15349 733 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 MAPRE2Q15555 327 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 HABP4Q5JVS0 413 aaKnown RBP17.53■□□□□ 0.4
VARS2-206ENST00000473916 TRMT11Q7Z4G4 463 aaKnown RBP17.53■□□□□ 0.4
VARS2-206ENST00000473916 SPATA19Q7Z5L4 167 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 FAM124AQ86V42 546 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 PGAM4Q8N0Y7 254 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 RNF175Q8N4F7 328 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 MED8Q96G25 268 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 MYOCQ99972 504 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 SLC25A23Q9BV35 468 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 DNAJC11Q9NVH1 559 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms