RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 STRADBQ9C0K7 418 aa10.73□□□□□ -0.69
MSH5-212ENST00000467319 ZNF768Q9H5H4 540 aaKnown RBP10.73□□□□□ -0.69
MSH5-212ENST00000467319 ACSS3Q9H6R3 686 aa10.73□□□□□ -0.69
MSH5-212ENST00000467319 POLR1BQ9H9Y6 1135 aa10.73□□□□□ -0.69
MSH5-212ENST00000467319 ASCL3Q9NQ33 180 aa10.73□□□□□ -0.69
MSH5-212ENST00000467319 SIDT1Q9NXL6 827 aaKnown RBP10.73□□□□□ -0.69
MSH5-212ENST00000467319 TAS2R13Q9NYV9 303 aa10.73□□□□□ -0.69
MSH5-212ENST00000467319 TRMT6Q9UJA5 497 aaKnown RBP10.73□□□□□ -0.69
MSH5-212ENST00000467319 NFU1Q9UMS0 254 aa10.73□□□□□ -0.69
MSH5-212ENST00000467319 SATB2Q9UPW6 733 aa10.73□□□□□ -0.69
MSH5-212ENST00000467319 NFS1Q9Y697 457 aa10.73□□□□□ -0.69
MSH5-212ENST00000467319 CFAP47Q6ZTR5 3102 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 FAM95CA0A1B0GW59 222 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 OR6C74A6NCV1 312 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 TLCD2A6NGC4 264 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 C1QTNF9BB2RNN3 333 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 MYO1CO00159 1063 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 MATN2O00339 956 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 BTN3A3O00478 584 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 BTN3A1O00481 513 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 PLD2O14939 933 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 CAPN5O15484 640 aaPredicted RBP10.72□□□□□ -0.69
MSH5-212ENST00000467319 MPOP05164 745 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 C1QTNF9P0C862 333 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 MPC1LP0DKB6 136 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 MYBL2P10244 700 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 ERGP11308 486 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 ZNF37AP17032 561 aaPredicted RBP10.72□□□□□ -0.69
MSH5-212ENST00000467319 AMD1P17707 334 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 MPSTP25325 297 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 DEKP35659 375 aaKnown RBP10.72□□□□□ -0.69
MSH5-212ENST00000467319 GP5P40197 560 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 CCNFP41002 786 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 SKIV2L2P42285 1042 aaKnown RBP10.72□□□□□ -0.69
MSH5-212ENST00000467319 BDKRB1P46663 353 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 RAB28P51157 221 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 GABREP78334 506 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 PRKG2Q13237 762 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 KRT33BQ14525 404 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 EFTUD2Q15029 972 aaKnown RBP eCLIP10.72□□□□□ -0.692e-16■■■■■ 41.1
MSH5-212ENST00000467319 KYNUQ16719 465 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 KLHL38Q2WGJ6 581 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 CCSMST1Q4G0I0 132 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 C3orf38Q5JPI3 329 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 TEX35Q5T0J7 233 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 LRRC8EQ6NSJ5 796 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 RAB11FIP2Q7L804 512 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 PIWIL4Q7Z3Z4 852 aaKnown RBP10.72□□□□□ -0.69
MSH5-212ENST00000467319 CLEC14AQ86T13 490 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 AMIGO1Q86WK6 493 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 CARFQ8N187 725 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 GPATCH11Q8N954 259 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 LINC01555Q8NAE3 123 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 FBXO15Q8NCQ5 510 aaPredicted RBP10.72□□□□□ -0.69
MSH5-212ENST00000467319 RCBTB1Q8NDN9 531 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 FLVCR1-AS1Q8TAF5 88 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 DENND1AQ8TEH3 1009 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 ASB11Q8WXH4 323 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 KLHL6Q8WZ60 621 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 ZDHHC12Q96GR4 267 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 TGM7Q96PF1 710 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 GPR22Q99680 433 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 RBBP8Q99708 897 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 ZMYND15Q9H091 742 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 SRMSQ9H3Y6 488 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 ANKZF1Q9H8Y5 726 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 OR6C2Q9NZP2 312 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 LOXL2Q9Y4K0 774 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 ZFHX4Q86UP3 3567 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 ACACAQ13085 2346 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 PKD1L2Q7Z442 2459 aa10.72□□□□□ -0.69
MSH5-212ENST00000467319 KRT87PA6NCN2 255 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 TMEM8BA6NDV4 472 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 CDRT15L2A8MXV6 281 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 GFYI3L273 518 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 RASGRF2O14827 1237 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 KIF1CO43896 1103 aaKnown RBP10.71□□□□□ -0.69
MSH5-212ENST00000467319 BRINP1O60477 761 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 ITGA2BP08514 1039 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 ABHD2P08910 425 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 MCM3P25205 808 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 PEBP1P30086 187 aaKnown RBP10.71□□□□□ -0.69
MSH5-212ENST00000467319 KPNA2P52292 529 aaKnown RBP10.71□□□□□ -0.69
MSH5-212ENST00000467319 PGGT1BP53609 377 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 TAS2R39P59534 338 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 ABRQ12979 859 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 SP140Q13342 867 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 ZKSCAN8Q15776 578 aaPredicted RBP10.71□□□□□ -0.69
MSH5-212ENST00000467319 DNTTIP2Q5QJE6 756 aaKnown RBP10.71□□□□□ -0.69
MSH5-212ENST00000467319 UGT3A1Q6NUS8 523 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 IRGCQ6NXR0 463 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 PAQR3Q6TCH7 311 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 CYHR1Q6ZMK1 362 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 GSPT2Q8IYD1 628 aaKnown RBP10.71□□□□□ -0.69
MSH5-212ENST00000467319 AGBL5Q8NDL9 886 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 OR4E2Q8NGC2 313 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 HMGCLL1Q8TB92 370 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 SKA2Q8WVK7 121 aaPredicted RBP10.71□□□□□ -0.69
MSH5-212ENST00000467319 UBXN4Q92575 508 aa10.71□□□□□ -0.69
MSH5-212ENST00000467319 SLC41A2Q96JW4 573 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms