RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 LMNTD1Q8N9Z9 388 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 NOA1Q8NC60 698 aaKnown RBP9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 ACVR1CQ8NER5 493 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 GSDMBQ8TAX9 411 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 STAMBPL1Q96FJ0 436 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 ZDHHC12Q96GR4 267 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 SNF8Q96H20 258 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 SIGLEC10Q96LC7 697 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 PANX3Q96QZ0 392 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 OR6C1Q96RD1 312 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 TAAR9Q96RI9 348 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 KLHL25Q9H0H3 589 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 TRIT1Q9H3H1 467 aaKnown RBP9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 SRMSQ9H3Y6 488 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 IARS2Q9NSE4 1012 aaKnown RBP9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 SOHLH2Q9NX45 425 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 SNX24Q9Y343 169 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 ZFHX4Q86UP3 3567 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 FREM2Q5SZK8 3169 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 IGHV5-51A0A0C4DH38 117 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 ZCWPW2A0A1B0GU75 182 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 KRT87PA6NCN2 255 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 PFDN6O15212 129 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 POLR3GO15318 223 aaPredicted RBP9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 RAD51CO43502 376 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 SASH3O75995 380 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 USP1O94782 785 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 GSTM1P09488 218 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 EBLN1P0CF75 366 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 LIPCP11150 499 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 PGAM1P18669 254 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 CHRM3P20309 590 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 OGNP20774 298 aaKnown RBP9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 MAGEA3P43357 314 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 BDKRB1P46663 353 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 CD151P48509 253 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 KPNA2P52292 529 aaKnown RBP9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 GSTM4Q03013 218 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 TLE3Q04726 772 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 RPA4Q13156 261 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 LONRF1Q17RB8 773 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 TYSND1Q2T9J0 566 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 HSP90AA5PQ58FG0 334 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 DNAJC21Q5F1R6 531 aaKnown RBP9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 DCAF12Q5T6F0 453 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 ARHGAP40Q5TG30 622 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 NEPROQ6NW34 567 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 CAPN12Q6ZSI9 719 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 SYDE1Q6ZW31 735 aaPredicted RBP9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 CENPUQ71F23 418 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 OTOAQ7RTW8 1153 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 HOOK3Q86VS8 718 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 ANKMY2Q8IV38 441 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 RASGRP3Q8IV61 690 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 MREGQ8N565 214 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 C2orf73Q8N5S3 287 aaPredicted RBP9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 SIDT2Q8NBJ9 832 aaKnown RBP9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 ASZ1Q8WWH4 475 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 SLCO2A1Q92959 643 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 KCTD12Q96CX2 325 aaKnown RBP9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 SGSM3Q96HU1 749 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 IL17FQ96PD4 163 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 FAM129AQ9BZQ8 928 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 P2RY12Q9H244 342 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 CCDC68Q9H2F9 335 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 ZNF768Q9H5H4 540 aaKnown RBP9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 MVB12BQ9H7P6 319 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 PPANQ9NQ55 473 aaKnown RBP9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 PDP2Q9P2J9 529 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 SLC17A6Q9P2U8 582 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 ADAM21Q9UKJ8 722 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 ICKQ9UPZ9 632 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 PCDHB11Q9Y5F2 797 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 PCDHGA7Q9Y5G6 932 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 NFS1Q9Y697 457 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 PCM1Q15154 2024 aa9.46□□□□□ -0.9
RTFDC1-205ENST00000466260 TEX51A0A1B0GUA7 166 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 MAGEB16A2A368 324 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 TLCD2A6NGC4 264 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 GOLGA6L10A6NI86 522 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 ISM1B1AKI9 464 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 STMND1H3BQB6 276 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 BTN3A3O00478 584 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 POLR1CO15160 346 aaPredicted RBP9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 NVLO15381 856 aaKnown RBP9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 RAD1O60671 282 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 ANKRD34CP0C6C1 535 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 ERVK-10P10266 1014 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 PKMP14618 531 aaKnown RBP9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 PVRP15151 417 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 RPS3P23396 243 aaKnown RBP eCLIP9.45□□□□□ -0.92e-6■□□□□ 9.8
RTFDC1-205ENST00000466260 IVDP26440 423 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 ACADLP28330 430 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 ELK3P41970 407 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 RPL21P46778 160 aaKnown RBP9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 RAB15P59190 212 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 MC2RQ01718 297 aa9.45□□□□□ -0.9
RTFDC1-205ENST00000466260 CRYMQ14894 314 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms