RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 SNX12Q9UMY4 172 aa13.04□□□□□ -0.32
COMMD3-205ENST00000463688 SRPK3Q9UPE1 567 aa13.04□□□□□ -0.32
COMMD3-205ENST00000463688 FASNP49327 2511 aaKnown RBP13.03□□□□□ -0.32
COMMD3-205ENST00000463688 COL27A1Q8IZC6 1860 aaPredicted RBP13.03□□□□□ -0.32
COMMD3-205ENST00000463688 C9J4A7 227 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 E5RI56 91 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 E7EQ34 232 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 GPC4O75487 556 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 VAPBO95292 243 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 RAB40ALP0C0E4 278 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 PIM1P11309 404 aaPredicted RBP13.03□□□□□ -0.32
COMMD3-205ENST00000463688 FOLR1P15328 257 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 AOAHP28039 575 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 PDHA2P29803 388 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 CA5AP35218 305 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 ITGA1P56199 1179 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 SH3BP2P78314 561 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 CDC20Q12834 499 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 PRKG2Q13237 762 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 ZC3H12BQ5HYM0 836 aaKnown RBP13.03□□□□□ -0.32
COMMD3-205ENST00000463688 YOD1Q5VVQ6 348 aaPredicted RBP13.03□□□□□ -0.32
COMMD3-205ENST00000463688 UGT3A1Q6NUS8 523 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 NEPROQ6NW34 567 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 TLDC1Q6P9B6 456 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 PPIL6Q8IXY8 311 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 DLG3Q92796 817 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 BBC3Q96PG8 261 aaPredicted RBP13.03□□□□□ -0.32
COMMD3-205ENST00000463688 DHRS4Q9BTZ2 278 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 AP1M1Q9BXS5 423 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 SLC25A18Q9H1K4 315 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 SLC2A6Q9UGQ3 507 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 CROTQ9UKG9 612 aa13.03□□□□□ -0.32
COMMD3-205ENST00000463688 TDRKHQ9Y2W6 561 aaKnown RBP13.03□□□□□ -0.32
COMMD3-205ENST00000463688 A0A0J9YY10 115 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 CTAGE9A4FU28 777 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 SLC9B1P1A6NJY1 282 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 KATNA1O75449 491 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 EBLN1P0CF75 366 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 MGAT1P26572 445 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 PTPN4P29074 926 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 GRIA1P42261 906 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 DNASE1L3Q13609 305 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 PTK6Q13882 451 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 KCNJ11Q14654 390 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 TYSND1Q2T9J0 566 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 IZUMO3Q5VZ72 239 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 PWWP2BQ6NUJ5 590 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 DUS1LQ6P1R4 473 aaKnown RBP13.02□□□□□ -0.33
COMMD3-205ENST00000463688 UNC5AQ6ZN44 842 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 ZNF534Q76KX8 674 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 TIPARPQ7Z3E1 657 aaKnown RBP13.02□□□□□ -0.33
COMMD3-205ENST00000463688 ZNF843Q8N446 348 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 PROKR1Q8TCW9 393 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 EXTL1Q92935 676 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 ZUFSPQ96AP4 578 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 CLIP3Q96DZ5 547 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 ELMO2Q96JJ3 720 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 FAM167BQ9BTA0 163 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 ACTR5Q9H9F9 607 aaPredicted RBP13.02□□□□□ -0.33
COMMD3-205ENST00000463688 IL1RAPL1Q9NZN1 696 aa13.02□□□□□ -0.33
COMMD3-205ENST00000463688 LOC101059948A0A1B0GTJ6 334 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 OR51F1A6NGY5 319 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 ISM1B1AKI9 464 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 BHMG1C9JSJ3 638 aaPredicted RBP13.01□□□□□ -0.33
COMMD3-205ENST00000463688 MKRN2OSH3BPM6 223 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 EIF3FO00303 357 aaPredicted RBP13.01□□□□□ -0.33
COMMD3-205ENST00000463688 BTN3A1O00481 513 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 OR1I1O60431 355 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 CREG1O75629 220 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 USP1O94782 785 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 CHRM5P08912 532 aaPredicted RBP13.01□□□□□ -0.33
COMMD3-205ENST00000463688 ENO3P13929 434 aaPredicted RBP13.01□□□□□ -0.33
COMMD3-205ENST00000463688 CHRM3P20309 590 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 CCR7P32248 378 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 ARSFP54793 590 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 COL9A2Q14055 689 aaPredicted RBP13.01□□□□□ -0.33
COMMD3-205ENST00000463688 DHX34Q14147 1143 aaKnown RBP13.01□□□□□ -0.33
COMMD3-205ENST00000463688 ARHGAP19Q14CB8 494 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 BRD3Q15059 726 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 ADGRF3Q8IZF5 1079 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 C19orf47Q8N9M1 422 aaKnown RBP13.01□□□□□ -0.33
COMMD3-205ENST00000463688 OR5AR1Q8NGP9 310 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 SLCO2A1Q92959 643 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 MR1Q95460 341 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 PMEPA1Q969W9 287 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 NACC2Q96BF6 587 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 ZNF501Q96CX3 271 aaPredicted RBP13.01□□□□□ -0.33
COMMD3-205ENST00000463688 SPATA7Q9P0W8 599 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.01□□□□□ -0.33
COMMD3-205ENST00000463688 PLCL2Q9UPR0 1127 aa13.01□□□□□ -0.33
COMMD3-205ENST00000463688 FARSAQ9Y285 508 aaKnown RBP13.01□□□□□ -0.33
COMMD3-205ENST00000463688 PABPN1LA6NDY0 278 aaKnown RBP13□□□□□ -0.33
COMMD3-205ENST00000463688 TARM1B6A8C7 271 aa13□□□□□ -0.33
COMMD3-205ENST00000463688 TMEM150CB9EJG8 249 aa13□□□□□ -0.33
COMMD3-205ENST00000463688 CCDC188H7C350 402 aa13□□□□□ -0.33
COMMD3-205ENST00000463688 MEN1O00255 615 aa13□□□□□ -0.33
COMMD3-205ENST00000463688 BTN3A3O00478 584 aa13□□□□□ -0.33
COMMD3-205ENST00000463688 CCNDBP1O95273 360 aa13□□□□□ -0.33
COMMD3-205ENST00000463688 CATP04040 527 aaKnown RBP13□□□□□ -0.33
COMMD3-205ENST00000463688 CBSLP0DN79 551 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms