RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 CRTC2Q53ET0 693 aaPredicted RBP9.85□□□□□ -0.83
SF3A3-204ENST00000462258 DNAJC21Q5F1R6 531 aaKnown RBP9.85□□□□□ -0.83
SF3A3-204ENST00000462258 RNF187Q5TA31 235 aaPredicted RBP9.85□□□□□ -0.83
SF3A3-204ENST00000462258 ATP1A1-AS1Q5TC04 95 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 PTRHD1Q6GMV3 140 aaKnown RBP9.85□□□□□ -0.83
SF3A3-204ENST00000462258 KIAA0930Q6ICG6 404 aaPredicted RBP9.85□□□□□ -0.83
SF3A3-204ENST00000462258 CASC4Q6P4E1 433 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 CCDC137Q6PK04 289 aaKnown RBP9.85□□□□□ -0.83
SF3A3-204ENST00000462258 CES3Q6UWW8 571 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 TRIM73Q86UV7 250 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 HOOK3Q86VS8 718 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 LRRC6Q86X45 466 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 VRK3Q8IV63 474 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 DCUN1D3Q8IWE4 304 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 REXO1L1PQ8IX06 675 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 C19orf47Q8N9M1 422 aaKnown RBP9.85□□□□□ -0.83
SF3A3-204ENST00000462258 ASZ1Q8WWH4 475 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 CPT1BQ92523 772 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 TRAPPC9Q96Q05 1148 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 PANX3Q96QZ0 392 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 OSBPL9Q96SU4 736 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 CARD6Q9BX69 1037 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 KLHL25Q9H0H3 589 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 P2RY12Q9H244 342 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 SYTL2Q9HCH5 934 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 KCND1Q9NSA2 647 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 OR6C2Q9NZP2 312 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 PADI1Q9ULC6 663 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 CDYLQ9Y232 598 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 FER1L5A0AVI2 2057 aa9.85□□□□□ -0.83
SF3A3-204ENST00000462258 SPENQ96T58 3664 aaKnown RBP9.85□□□□□ -0.83
SF3A3-204ENST00000462258 A0A0J9YY10 115 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 B8ZZF3 427 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 GOLGA8KD6RF30 607 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 GOLGA8TH3BQL2 631 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 MAP3K7O43318 606 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 AVILO75366 819 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 KATNA1O75449 491 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 GPC4O75487 556 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 NDUFS3O75489 264 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 VAPBO95292 243 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 CHRM5P08912 532 aaPredicted RBP9.84□□□□□ -0.83
SF3A3-204ENST00000462258 MSL3P1P0C860 447 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 PAMP19021 973 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 OGNP20774 298 aaKnown RBP9.84□□□□□ -0.83
SF3A3-204ENST00000462258 RPS3P23396 243 aaKnown RBP eCLIP9.84□□□□□ -0.83
SF3A3-204ENST00000462258 AOAHP28039 575 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 PEBP1P30086 187 aaKnown RBP9.84□□□□□ -0.83
SF3A3-204ENST00000462258 COILP38432 576 aaPredicted RBP9.84□□□□□ -0.83
SF3A3-204ENST00000462258 FNTAP49354 379 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 RAB28P51157 221 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 GPS2Q13227 327 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 TYSND1Q2T9J0 566 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 DEFB110Q30KQ9 67 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 DEFB109BQ30KR1 87 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 ZNF789Q5FWF6 425 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 CTSL3PQ5NE16 218 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 ARMC3Q5W041 872 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 MRNIPQ6NTE8 343 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 UNC5DQ6UXZ4 953 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 UNC5AQ6ZN44 842 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 OR1L3Q8NH93 324 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 GSDMBQ8TAX9 411 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 ACTRT1Q8TDG2 376 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 GRK7Q8WTQ7 553 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 COG1Q8WTW3 980 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 LPGAT1Q92604 370 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 ZNF669Q96BR6 464 aaPredicted RBP9.84□□□□□ -0.83
SF3A3-204ENST00000462258 SERPINB12Q96P63 405 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 RUFY1Q96T51 708 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 TRIM56Q9BRZ2 755 aaKnown RBP9.84□□□□□ -0.83
SF3A3-204ENST00000462258 ADNPQ9H2P0 1102 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 ACTL8Q9H568 366 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 XAB2Q9HCS7 855 aaKnown RBP9.84□□□□□ -0.83
SF3A3-204ENST00000462258 STARD5Q9NSY2 213 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 GEMIN8Q9NWZ8 242 aaKnown RBP9.84□□□□□ -0.83
SF3A3-204ENST00000462258 SPHK1Q9NYA1 384 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 SAMD15Q9P1V8 674 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 SNX12Q9UMY4 172 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 PCDHB3Q9Y5E6 796 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 PCDHGA6Q9Y5G7 932 aa9.84□□□□□ -0.83
SF3A3-204ENST00000462258 SPTBP11277 2137 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 CDC14CA4D256 554 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 GOLGA8MH3BSY2 632 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 CES2O00748 559 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 PFDN6O15212 129 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 SLC28A2O43868 658 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 SLCO2B1O94956 709 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 TPBGLP0DKB5 382 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 MLNP12872 115 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 CYP2A7P20853 494 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 ITGA1P56199 1179 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 RPS18P62269 152 aaKnown RBP9.83□□□□□ -0.84
SF3A3-204ENST00000462258 ERV3-1Q14264 604 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 KIR2DS3Q14952 304 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 PRAMEF17Q5VTA0 474 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 FAM199XQ6PEV8 388 aaPredicted RBP9.83□□□□□ -0.84
SF3A3-204ENST00000462258 CDHR3Q6ZTQ4 885 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 OTOAQ7RTW8 1153 aa9.83□□□□□ -0.84
SF3A3-204ENST00000462258 PRICKLE2Q7Z3G6 844 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms