RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 RAB6BQ9NRW1 208 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 OR6C2Q9NZP2 312 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 SLC2A6Q9UGQ3 507 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 TCFL5Q9UL49 500 aa22.03■■□□□ 1.12
PTPN4-207ENST00000460162 FER1L5A0AVI2 2057 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 TNRC6AQ8NDV7 1962 aaKnown RBP22.02■■□□□ 1.12
PTPN4-207ENST00000460162 ARGFXA6NJG6 315 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 BHMG1C9JSJ3 638 aaPredicted RBP22.02■■□□□ 1.12
PTPN4-207ENST00000460162 SNRNP200O75643 2136 aaKnown RBP22.02■■□□□ 1.12
PTPN4-207ENST00000460162 CHRM5P08912 532 aaPredicted RBP22.02■■□□□ 1.12
PTPN4-207ENST00000460162 PTGIRP43119 386 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 BRD3Q15059 726 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 NCF4Q15080 339 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 LCN10Q6JVE6 187 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 GPR135Q8IZ08 494 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 CCDC89Q8N998 374 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 N4BP2L2Q92802 583 aaPredicted RBP22.02■■□□□ 1.12
PTPN4-207ENST00000460162 TCTN2Q96GX1 697 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 SLC25A23Q9BV35 468 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 TSSK1BQ9BXA7 367 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 ING2Q9H160 280 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 PAK5Q9P286 719 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 TCAF1Q9Y4C2 921 aa22.02■■□□□ 1.12
PTPN4-207ENST00000460162 MAST4O15021 2626 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 RELNP78509 3460 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 A0A0J9YY10 115 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 C9J4A7 227 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 OR1I1O60431 355 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 PDGFAP04085 211 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 CAPN1P07384 714 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 PPARGP37231 505 aaPredicted RBP22.01■■□□□ 1.11
PTPN4-207ENST00000460162 GRIA1P42261 906 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 PGDP52209 483 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 PRAMEP78395 509 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 CHAF1BQ13112 559 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 IGFBP7Q16270 282 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 AARS2Q5JTZ9 985 aaKnown RBP22.01■■□□□ 1.11
PTPN4-207ENST00000460162 ZNF385CQ66K41 422 aaPredicted RBP22.01■■□□□ 1.11
PTPN4-207ENST00000460162 ZNF534Q76KX8 674 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 SLC22A15Q8IZD6 547 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 PPHLN1Q8NEY8 458 aaKnown RBP22.01■■□□□ 1.11
PTPN4-207ENST00000460162 OR4L1Q8NH43 312 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 C1orf54Q8WWF1 131 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 MIB2Q96AX9 1013 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 ZNF778Q96MU6 729 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 OR2A14Q96R47 310 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 DHRS4Q9BTZ2 278 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 MLXIPLQ9NP71 852 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 GUCA1BQ9UMX6 200 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 PADI2Q9Y2J8 665 aa22.01■■□□□ 1.11
PTPN4-207ENST00000460162 TDRKHQ9Y2W6 561 aaKnown RBP22.01■■□□□ 1.11
PTPN4-207ENST00000460162 MED13Q9UHV7 2174 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 ZNF749O43361 778 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 APRTP07741 180 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 AGXTP21549 392 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 PTCHD3Q3KNS1 767 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 FASTKD1Q53R41 847 aaKnown RBP22■■□□□ 1.11
PTPN4-207ENST00000460162 DNAJC21Q5F1R6 531 aaKnown RBP22■■□□□ 1.11
PTPN4-207ENST00000460162 PAPD7Q5XG87 772 aaKnown RBP22■■□□□ 1.11
PTPN4-207ENST00000460162 NAPRTQ6XQN6 538 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 TRIM73Q86UV7 250 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 OR6P1Q8NGX9 317 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 FLVCR1-AS1Q8TAF5 88 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 C17orf62Q9BQA9 187 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 EIF2B3Q9NR50 452 aaKnown RBP22■■□□□ 1.11
PTPN4-207ENST00000460162 AP1M2Q9Y6Q5 423 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 DOPEY2Q9Y3R5 2298 aa22■■□□□ 1.11
PTPN4-207ENST00000460162 SEC16AO15027 2179 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 COL12A1Q99715 3063 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 OR2B3O76000 313 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 TMEM63AO94886 807 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 RPN2P04844 631 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 TPBGLP0DKB5 382 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 GABRA4P48169 554 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 CD97P48960 835 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 SNX1Q13596 522 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 KIR2DS3Q14952 304 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 SLC5A12Q1EHB4 618 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 COLEC12Q5KU26 742 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 AP1M1Q9BXS5 423 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 FAM60AQ9NP50 221 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 SPHK1Q9NYA1 384 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 PLAAQ9Y263 795 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 PCDHGB7Q9Y5F8 929 aa21.99■■□□□ 1.11
PTPN4-207ENST00000460162 H3BMH7 237 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 CEACAM4O75871 244 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 ETS1P14921 441 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 PKLRP30613 574 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 CCR7P32248 378 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 RAB28P51157 221 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 SEMA3AQ14563 771 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 RPS6KA1Q15418 735 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 ZIC1Q15915 447 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 DEFB110Q30KQ9 67 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 MEI1Q5TIA1 1274 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 RHBDD2Q6NTF9 364 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 DRICH1Q6PGQ1 229 aaPredicted RBP21.98■■□□□ 1.11
PTPN4-207ENST00000460162 PRUNE1Q86TP1 453 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 ATCAYQ86WG3 371 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 GLIS1Q8NBF1 620 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms