RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 SERTAD3Q9UJW9 196 aa19.45■□□□□ 0.7
LRCH3-208ENST00000443727 PLAGL1Q9UM63 463 aa19.45■□□□□ 0.7
LRCH3-208ENST00000443727 SPTA1P02549 2419 aa19.45■□□□□ 0.7
LRCH3-208ENST00000443727 TCRBV7S3A2A0A539 114 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 PFDN6O15212 129 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 VAPBO95292 243 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 RPN2P04844 631 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 KLK3P07288 261 aaPredicted RBP19.44■□□□□ 0.7
LRCH3-208ENST00000443727 CHRM5P08912 532 aaPredicted RBP19.44■□□□□ 0.7
LRCH3-208ENST00000443727 CYP2A7P20853 494 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 RPS15P62841 145 aaKnown RBP19.44■□□□□ 0.7
LRCH3-208ENST00000443727 ABRQ12979 859 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 MRNIPQ6NTE8 343 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 FAM199XQ6PEV8 388 aaPredicted RBP19.44■□□□□ 0.7
LRCH3-208ENST00000443727 SLC22A15Q8IZD6 547 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 KRT222Q8N1A0 295 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 RASGEF1CQ8N431 466 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 SKA2Q8WVK7 121 aaPredicted RBP19.44■□□□□ 0.7
LRCH3-208ENST00000443727 CPT1BQ92523 772 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 CLIP3Q96DZ5 547 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 TRAPPC9Q96Q05 1148 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 PANX3Q96QZ0 392 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 KIFC1Q9BW19 673 aa19.44■□□□□ 0.7
LRCH3-208ENST00000443727 MRM3Q9HC36 420 aaKnown RBP19.44■□□□□ 0.7
LRCH3-208ENST00000443727 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.43■□□□□ 0.7
LRCH3-208ENST00000443727 CDC14CA4D256 554 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 J3QKU1 62 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 PGRMC1O00264 195 aaKnown RBP19.43■□□□□ 0.7
LRCH3-208ENST00000443727 TERTO14746 1132 aaKnown RBP19.43■□□□□ 0.7
LRCH3-208ENST00000443727 CREG1O75629 220 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 UGT2B7P16662 529 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 EIF3BP55884 814 aaKnown RBP19.43■□□□□ 0.7
LRCH3-208ENST00000443727 KCNJ11Q14654 390 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 TTC27Q6P3X3 843 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 TRIM73Q86UV7 250 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 LRRC6Q86X45 466 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 OR1L3Q8NH93 324 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 LKAAEAR1Q8TD35 194 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 MFSD3Q96ES6 412 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 GPR87Q9BY21 358 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 ACTL8Q9H568 366 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 SAMD15Q9P1V8 674 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 TUBD1Q9UJT1 453 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 SOX13Q9UN79 622 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 POLHQ9Y253 713 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 PCDHGA6Q9Y5G7 932 aa19.43■□□□□ 0.7
LRCH3-208ENST00000443727 TLN1Q9Y490 2541 aaKnown RBP19.42■□□□□ 0.7
LRCH3-208ENST00000443727 GOLGA6L10A0A0M3HER8 536 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 ISM1B1AKI9 464 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 GOLGA8KD6RF30 607 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 GOLGA8TH3BQL2 631 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 KPNA5O15131 536 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 KIF5CO60282 957 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 AVILO75366 819 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 PAMP19021 973 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 AOAHP28039 575 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 NFKB2Q00653 900 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 PRAMEF17Q5VTA0 474 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 TTC23LQ6PF05 361 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 CCDC137Q6PK04 289 aaKnown RBP19.42■□□□□ 0.7
LRCH3-208ENST00000443727 OTOAQ7RTW8 1153 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 VRK3Q8IV63 474 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 C19orf47Q8N9M1 422 aaKnown RBP19.42■□□□□ 0.7
LRCH3-208ENST00000443727 TCTN2Q96GX1 697 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 OR2A14Q96R47 310 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 ACTR5Q9H9F9 607 aaPredicted RBP19.42■□□□□ 0.7
LRCH3-208ENST00000443727 AKIRIN1Q9H9L7 192 aaPredicted RBP19.42■□□□□ 0.7
LRCH3-208ENST00000443727 SPHK1Q9NYA1 384 aa19.42■□□□□ 0.7
LRCH3-208ENST00000443727 GPC4O75487 556 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 MSL3P1P0C860 447 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 RPS3P23396 243 aaKnown RBP eCLIP19.41■□□□□ 0.7
LRCH3-208ENST00000443727 PTPN4P29074 926 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 COILP38432 576 aaPredicted RBP19.41■□□□□ 0.7
LRCH3-208ENST00000443727 RAB28P51157 221 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 ITGA1P56199 1179 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 GPS2Q13227 327 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 KIR2DS3Q14952 304 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 RNF187Q5TA31 235 aaPredicted RBP19.41■□□□□ 0.7
LRCH3-208ENST00000443727 ANKRD22Q5VYY1 191 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 UNC5DQ6UXZ4 953 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 CDHR3Q6ZTQ4 885 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 DCUN1D3Q8IWE4 304 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 GPR135Q8IZ08 494 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 SLC35F6Q8N357 371 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 C9orf43Q8TAL5 461 aaPredicted RBP19.41■□□□□ 0.7
LRCH3-208ENST00000443727 SEC14L1Q92503 715 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 OSBPL9Q96SU4 736 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 P2RY12Q9H244 342 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 CHST8Q9H2A9 424 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 TRMT1Q9NXH9 659 aaKnown RBP19.41■□□□□ 0.7
LRCH3-208ENST00000443727 CIDEBQ9UHD4 219 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 SLC39A10Q9ULF5 831 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 CDYLQ9Y232 598 aa19.41■□□□□ 0.7
LRCH3-208ENST00000443727 A0A0J9YY10 115 aa19.4■□□□□ 0.7
LRCH3-208ENST00000443727 E7EQ34 232 aa19.4■□□□□ 0.7
LRCH3-208ENST00000443727 GOLGA8MH3BSY2 632 aa19.4■□□□□ 0.7
LRCH3-208ENST00000443727 MEN1O00255 615 aa19.4■□□□□ 0.7
LRCH3-208ENST00000443727 SLCO2B1O94956 709 aa19.4■□□□□ 0.7
LRCH3-208ENST00000443727 TPBGLP0DKB5 382 aa19.4■□□□□ 0.7
LRCH3-208ENST00000443727 ARNTP27540 789 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms