RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SYBUQ9NX95 663 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 TUBD1Q9UJT1 453 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 SERTAD3Q9UJW9 196 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 JRKLQ9Y4A0 524 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 IQCF5A8MTL0 148 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 ISM1B1AKI9 464 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 BHMG1C9JSJ3 638 aaPredicted RBP19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 CREG1O75629 220 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 CHRM5P08912 532 aaPredicted RBP19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 UGT2B7P16662 529 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 ACADLP28330 430 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 NMBRP28336 390 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 CCR7P32248 378 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 EIF3BP55884 814 aaKnown RBP19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 MRNIPQ6NTE8 343 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 LRRC8BQ6P9F7 803 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 FAM199XQ6PEV8 388 aaPredicted RBP19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 SDCCAG8Q86SQ7 713 aaPredicted RBP19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 TRIM73Q86UV7 250 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 GPR135Q8IZ08 494 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 SLC22A15Q8IZD6 547 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 KRT222Q8N1A0 295 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 PRELID2Q8N945 189 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 C19orf47Q8N9M1 422 aaKnown RBP19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 MAGOHBQ96A72 148 aaKnown RBP19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 PBKQ96KB5 322 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 TRAPPC9Q96Q05 1148 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 CARD6Q9BX69 1037 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 GPR87Q9BY21 358 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 ACTR5Q9H9F9 607 aaPredicted RBP19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 TREX1Q9NSU2 369 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 OR6C2Q9NZP2 312 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 SAMD15Q9P1V8 674 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 MARCH4Q9P2E8 410 aaPredicted RBP19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 MAN2B2Q9Y2E5 1009 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 PCDHGA6Q9Y5G7 932 aa19.22■□□□□ 0.67
SHROOM1-204ENST00000440118 GOLGA6L10A0A0M3HER8 536 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 E7EQ34 232 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 KRT14P02533 472 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 PAMP19021 973 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 ITGA1P56199 1179 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 GPS2Q13227 327 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 KCTD19Q17RG1 926 aaPredicted RBP19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 TTC23LQ6PF05 361 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 ATG14Q6ZNE5 492 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 LRRC6Q86X45 466 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 PTRH1Q86Y79 214 aaKnown RBP19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 OR1L3Q8NH93 324 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 LKAAEAR1Q8TD35 194 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 AP1M1Q9BXS5 423 aa19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 MRM3Q9HC36 420 aaKnown RBP19.21■□□□□ 0.67
SHROOM1-204ENST00000440118 A0A0J9YY10 115 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 PYCARD-AS1I3L0S3 204 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 PGRMC1O00264 195 aaKnown RBP19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 TERTO14746 1132 aaKnown RBP19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 ZSCAN12O43309 604 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 VAPBO95292 243 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 PTPN4P29074 926 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 RAB28P51157 221 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 RPS18P62269 152 aaKnown RBP19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 ABRQ12979 859 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 RNF187Q5TA31 235 aaPredicted RBP19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 CES3Q6UWW8 571 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 OTOAQ7RTW8 1153 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 DCUN1D3Q8IWE4 304 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 MFSD3Q96ES6 412 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 MS4A14Q96JA4 679 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 TRIM4Q9C037 500 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 GRPEL1Q9HAV7 217 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 ZNF71Q9NQZ8 489 aaPredicted RBP19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 SNX7Q9UNH6 387 aa19.2■□□□□ 0.66
SHROOM1-204ENST00000440118 MKRN2OSH3BPM6 223 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 KPNA5O15131 536 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 KCNJ11Q14654 390 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 KIR2DS3Q14952 304 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 DEFB110Q30KQ9 67 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 PRAMEF17Q5VTA0 474 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 UNC5DQ6UXZ4 953 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 CDHR3Q6ZTQ4 885 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 SYVN1Q86TM6 617 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 TAX1BP1Q86VP1 789 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 VRK3Q8IV63 474 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 RAB42Q8N4Z0 105 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 TCTN2Q96GX1 697 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 FOPNLQ96NB1 174 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 LRFN5Q96NI6 719 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 RUFY1Q96T51 708 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 KIFC1Q9BW19 673 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 CHST8Q9H2A9 424 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 SPHK1Q9NYA1 384 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 CIDEBQ9UHD4 219 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 SLC39A10Q9ULF5 831 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 SOX13Q9UN79 622 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 KCNMB2Q9Y691 235 aa19.19■□□□□ 0.66
SHROOM1-204ENST00000440118 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 TCRBV7S3A2A0A539 114 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 C9J4A7 227 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 GOLGA8KD6RF30 607 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 GOLGA8TH3BQL2 631 aa19.18■□□□□ 0.66
SHROOM1-204ENST00000440118 MEN1O00255 615 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms