RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ACTR10Q9NZ32 417 aa12.12□□□□□ -0.47
SMPD4-204ENST00000430682 IL1RAPL1Q9NZN1 696 aa12.12□□□□□ -0.47
SMPD4-204ENST00000430682 GALPQ9UBC7 116 aa12.12□□□□□ -0.47
SMPD4-204ENST00000430682 ASF1AQ9Y294 204 aa12.12□□□□□ -0.47
SMPD4-204ENST00000430682 TDRKHQ9Y2W6 561 aaKnown RBP12.12□□□□□ -0.47
SMPD4-204ENST00000430682 UTP20O75691 2785 aaKnown RBP12.12□□□□□ -0.47
SMPD4-204ENST00000430682 USP27XA6NNY8 438 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 H3BMH7 237 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 K7EM74 188 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 KATNA1O75449 491 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 VAPBO95292 243 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 CHRM5P08912 532 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-204ENST00000430682 UGT2B7P16662 529 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 TCN2P20062 427 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 AOAHP28039 575 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 COILP38432 576 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-204ENST00000430682 ARL4DP49703 201 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 POLE2P56282 527 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 HSPA14Q0VDF9 509 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 GPS1Q13098 491 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 PRKAA1Q13131 559 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 DNASE1L3Q13609 305 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 ERV3-1Q14264 604 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 CYP1B1Q16678 543 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 CCSMST1Q4G0I0 132 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 LYPLAL1Q5VWZ2 237 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 ZNF517Q6ZMY9 492 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-204ENST00000430682 TMEM151BQ8IW70 566 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 TBC1D21Q8IYX1 336 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 LINC01555Q8NAE3 123 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 OR5K2Q8NHB8 316 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.11□□□□□ -0.476e-7■■■□□ 15.7
SMPD4-204ENST00000430682 MAGOHBQ96A72 148 aaKnown RBP12.11□□□□□ -0.47
SMPD4-204ENST00000430682 FCRL4Q96PJ5 515 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 IL22Q9GZX6 179 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 GEMIN8Q9NWZ8 242 aaKnown RBP12.11□□□□□ -0.47
SMPD4-204ENST00000430682 TRMT1Q9NXH9 659 aaKnown RBP12.11□□□□□ -0.47
SMPD4-204ENST00000430682 PADI1Q9ULC6 663 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 SOX13Q9UN79 622 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 RUVBL2Q9Y230 463 aaKnown RBP12.11□□□□□ -0.47
SMPD4-204ENST00000430682 JRKLQ9Y4A0 524 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 DOCK10Q96BY6 2186 aa12.11□□□□□ -0.47
SMPD4-204ENST00000430682 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-204ENST00000430682 PIPSLA2A3N6 862 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 QSOX1O00391 747 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 PRMT5O14744 637 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-204ENST00000430682 SCRG1O75711 98 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 CAPN1P07384 714 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 DEFB110Q30KQ9 67 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 SYTL3Q4VX76 610 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 PLEKHS1Q5SXH7 462 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 SPESP1Q6UW49 350 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 C4orf22Q6V702 233 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 CARFQ8N187 725 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 C2orf73Q8N5S3 287 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-204ENST00000430682 CFAP61Q8NHU2 1237 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 LPGAT1Q92604 370 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 PBKQ96KB5 322 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 BIRC8Q96P09 236 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 IL17FQ96PD4 163 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 MRM3Q9HC36 420 aaKnown RBP12.1□□□□□ -0.47
SMPD4-204ENST00000430682 BFARQ9NZS9 450 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 KLHL20Q9Y2M5 609 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 PCDHGA6Q9Y5G7 932 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 NFS1Q9Y697 457 aa12.1□□□□□ -0.47
SMPD4-204ENST00000430682 NUP210LQ5VU65 1888 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 C2orf74A8MZ97 194 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 TMEM150CB9EJG8 249 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 GOLGA8MH3BSY2 632 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 NIPSNAP2O75323 286 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 CREG1O75629 220 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 SLCO2B1O94956 709 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 CCNYL3P0C7X3 344 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 PKLRP30613 574 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 SHMT2P34897 504 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 RORAP35398 523 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 TTPAP49638 278 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 EIF3BP55884 814 aaKnown RBP12.09□□□□□ -0.47
SMPD4-204ENST00000430682 CDK16Q00536 496 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 KCNAB2Q13303 367 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 IL10RAQ13651 578 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 KYNUQ16719 465 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 CRTC2Q53ET0 693 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-204ENST00000430682 COLEC12Q5KU26 742 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 TMTC4Q5T4D3 741 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 ZNF449Q6P9G9 518 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 CCDC137Q6PK04 289 aaKnown RBP12.09□□□□□ -0.47
SMPD4-204ENST00000430682 CENPUQ71F23 418 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 BPHLQ86WA6 291 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-204ENST00000430682 PTRH1Q86Y79 214 aaKnown RBP12.09□□□□□ -0.47
SMPD4-204ENST00000430682 TMEM126BQ8IUX1 230 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 FAM136AQ96C01 138 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 EFHD1Q9BUP0 239 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 SPRTNQ9H040 489 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-204ENST00000430682 CHST8Q9H2A9 424 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 ACTL8Q9H568 366 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 LATS2Q9NRM7 1088 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 HOMER3Q9NSC5 361 aa12.09□□□□□ -0.47
SMPD4-204ENST00000430682 PCMTD2Q9NV79 361 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms