RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 VWDEQ8N2E2 1590 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 RNF225M0QZC1 329 aaPredicted RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 TRAFD1O14545 582 aaPredicted RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 REM1O75628 298 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 MTHFD1P11586 935 aaKnown RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 TM4SF1P30408 202 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 GGT5P36269 586 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 GDF10P55107 478 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 NXPE1Q8N323 547 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 AADATQ8N5Z0 425 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 SPERTQ8NA61 448 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 C11orf65Q8NCR3 313 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 YARS2Q9Y2Z4 477 aaKnown RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 SNX4O95219 450 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 TEAD2Q15562 447 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 GPR153Q6NV75 609 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 Q6ZVU0 165 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 AMZ2Q86W34 360 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 RASGEF1AQ8N9B8 481 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 KCNK6Q9Y257 313 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 PLLPQ9Y342 182 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 PREX1Q8TCU6 1659 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 FAM240BA0A1B0GVZ2 78 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 GLOD5A6NK44 160 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 CYB5AP00167 134 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 RHOQP17081 205 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 HSD11B1P28845 292 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 IFNL1Q8IU54 200 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 TIFAQ96CG3 184 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 HSD17B14Q9BPX1 270 aa13.52□□□□□ -0.24
VAPA-202ENST00000400000 ZNF726A6NNF4 738 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 NIPSNAP2O75323 286 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 IFNW1P05000 195 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 VSTM1Q6UX27 236 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 GATSQ8NAP1 163 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 COMMD4Q9H0A8 199 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 ACSS3Q9H6R3 686 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 MEAF6Q9HAF1 191 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 FAM227AF5H4B4 570 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 UGT2B11O75310 529 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 LRCH4O75427 683 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 CES1P23141 567 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 FSTL4Q6MZW2 842 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 ARCQ7LC44 396 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 TMCO2Q7Z6W1 182 aaPredicted RBP13.52□□□□□ -0.25
VAPA-202ENST00000400000 TBL1XR1Q9BZK7 514 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 ZNF446Q9NWS9 450 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 VNN3Q9NY84 501 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 COMMD3Q9UBI1 195 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 MAGEL2Q9UJ55 1249 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 COMMD3-BMI1R4GMX3 469 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 A0A1B0GVM2 712 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 TCAF2A6NFQ2 919 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 OR1I1O60431 355 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 WFS1O76024 890 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 ARL3P36405 182 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 CLCNKAP51800 687 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 PRR5P85299 388 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 HMGCS1Q01581 520 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 TIGD5Q53EQ6 642 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 TTLL10Q6ZVT0 673 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 USP30Q70CQ3 517 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 PIM3Q86V86 326 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 RTKNQ9BST9 563 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 C11orf84Q9BUA3 381 aaPredicted RBP13.52□□□□□ -0.25
VAPA-202ENST00000400000 BCAS3Q9H6U6 928 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 ZNF224Q9NZL3 707 aa13.52□□□□□ -0.25
VAPA-202ENST00000400000 C5orf51A6NDU8 294 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 MAGEB17A8MXT2 336 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 GSC2O15499 205 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 GADD45GO95257 159 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 RAB2AP61019 212 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 PDGFRLQ15198 375 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 STRADAQ7RTN6 431 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 RANBP3LQ86VV4 465 aaPredicted RBP13.51□□□□□ -0.25
VAPA-202ENST00000400000 ECHDC2Q86YB7 292 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 CMTR2Q8IYT2 770 aaKnown RBP13.51□□□□□ -0.25
VAPA-202ENST00000400000 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.51□□□□□ -0.252e-6■□□□□ 10.3
VAPA-202ENST00000400000 PNPLA3Q9NST1 481 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 CDH22Q9UJ99 828 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 FZD10Q9ULW2 581 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 PCDHA2Q9Y5H9 948 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 JUNP05412 331 aaKnown RBP13.51□□□□□ -0.25
VAPA-202ENST00000400000 HOXC6P09630 235 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 NRG3P56975 720 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 KLHL26Q53HC5 615 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 NOXRED1Q6NXP6 359 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 LCLAT1Q6UWP7 414 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 SNX27Q96L92 541 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.51□□□□□ -0.251e-8■■■■■ 31.7
VAPA-202ENST00000400000 ATXN7L1Q9ULK2 861 aaPredicted RBP13.51□□□□□ -0.25
VAPA-202ENST00000400000 ELOA3DA6NLF2 546 aaPredicted RBP13.51□□□□□ -0.25
VAPA-202ENST00000400000 CCNB2O95067 398 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 PAPSS2O95340 614 aaPredicted RBP13.51□□□□□ -0.25
VAPA-202ENST00000400000 SLC1A2P43004 574 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 DCTN2Q13561 401 aaKnown RBP13.51□□□□□ -0.25
VAPA-202ENST00000400000 ELOA3BQ3SY89 546 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 SCGB2B2Q4G0G5 96 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 COLEC12Q5KU26 742 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms